Sacu_v1.1_s0055.g014489 (PGP6)

Aliases : PGP6

Description : subfamily ABCB transporter & original description: CDS=1-4245

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0055.g014489

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00263610	ABCB19,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AT1G02520	PGP11	P-glycoprotein 11	0.03	OrthoFinder output from all 47 species
AT2G39480	PGP6	P-glycoprotein 6	0.03	OrthoFinder output from all 47 species
Adi_g019429	PGP20	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g03780	PGP20	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g30144	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Aop_g13591	PGP6	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g38133	No alias	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene14156.t1	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene32172.t1	PGP2, Aspi01Gene32172	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.02G084300.1	ABCB19,...	subfamily ABCB transporter & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.14G054100.1	ABCB19,...	subfamily ABCB transporter & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g10744	PGP6	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g08511	PGP11	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g22175	PGP20	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Gb_36503	No alias	serine carboxypeptidase. subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
LOC_Os01g18670.1	PGP21, LOC_Os01g18670	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
LOC_Os01g50160.1	PGP11, LOC_Os01g50160	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
LOC_Os03g17180.1	PGP20, LOC_Os03g17180	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Len_g04845	PGP20	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
MA_10432169g0010	PGP11	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
MA_1824g0020	No alias	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
MA_18604g0010	PGP12	ABC transporter B family member 12 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_6958g0010	PGP21	ABC transporter B family member 21 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Mp2g02910.1	ABCB19,...	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Mp3g11830.1	ABCB19,...	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
Msp_g26680	PGP11	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g36979	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g04820	PGP20	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g26459	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pp3c17_16450V3.1	ABCB19,...	ATP binding cassette subfamily B19	0.01	OrthoFinder output from all 47 species
Sam_g27139	No alias	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Solyc06g009290.4.1	PGP21, Solyc06g009290	subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
Spa_g03247	ATPGP4, PGP4, ABCB4, MDR4	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e001258_P003	PGP20, Zm00001e001258	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	HCCA
CC	GO:0000159	protein phosphatase type 2A complex	IEP	HCCA
MF	GO:0003951	NAD+ kinase activity	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
MF	GO:0005546	phosphatidylinositol-4,5-bisphosphate binding	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006739	NADP metabolic process	IEP	HCCA
BP	GO:0006741	NADP biosynthetic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006887	exocytosis	IEP	HCCA
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
MF	GO:0010181	FMN binding	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0019208	phosphatase regulator activity	IEP	HCCA
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	HCCA
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	HCCA
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	HCCA
MF	GO:0019888	protein phosphatase regulator activity	IEP	HCCA
BP	GO:0032940	secretion by cell	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA
MF	GO:0035673	oligopeptide transmembrane transporter activity	IEP	HCCA
MF	GO:0042887	amide transmembrane transporter activity	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	HCCA
BP	GO:0046903	secretion	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	HCCA
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA
BP	GO:0140352	export from cell	IEP	HCCA
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
MF	GO:1901981	phosphatidylinositol phosphate binding	IEP	HCCA
MF	GO:1902936	phosphatidylinositol bisphosphate binding	IEP	HCCA
CC	GO:1903293	phosphatase complex	IEP	HCCA
MF	GO:1904680	peptide transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	80	351
IPR011527	ABC1_TM_dom	844	1104
IPR003439	ABC_transporter-like_ATP-bd	424	566
IPR003439	ABC_transporter-like_ATP-bd	1183	1330

External Links

No external refs found!

Sacu_v1.1_s0055.g014489 (PGP6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation