Sacu_v1.1_s0054.g014285 (THO7, AtTHO7)

Aliases : THO7, AtTHO7

Description : component *(THOC7) of mRNP trafficking THO subcomplex & original description: CDS=196-1017

Gene families : OG0004772 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004772_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0054.g014285

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00048p00073350	THO7, AtTHO7,...	RNA processing.messenger ribonucleoprotein particle...	0.02	OrthoFinder output from all 47 species
Als_g09188	THO7, AtTHO7	component *(THOC7) of mRNP trafficking THO subcomplex &...	0.03	OrthoFinder output from all 47 species
Ore_g43703	No alias	component *(THOC7) of mRNP trafficking THO subcomplex &...	0.02	OrthoFinder output from all 47 species
Pnu_g12799	THO7, AtTHO7	component *(THOC7) of mRNP trafficking THO subcomplex &...	0.03	OrthoFinder output from all 47 species
Spa_g05269	THO7, AtTHO7	component *(THOC7) of mRNP trafficking THO subcomplex &...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000347	THO complex	None	Extended
CC	GO:0000445	THO complex part of transcription export complex	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006397	mRNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
MF	GO:0003712	transcription coregulator activity	IEP	HCCA
MF	GO:0004177	aminopeptidase activity	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008235	metalloexopeptidase activity	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
CC	GO:0016592	mediator complex	IEP	HCCA
MF	GO:0030145	manganese ion binding	IEP	HCCA
MF	GO:0031072	heat shock protein binding	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
MF	GO:0070006	metalloaminopeptidase activity	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008501	THOC7/Mft1	54	190

External Links

No external refs found!