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  5. Sacu_v1.1_s0036.g011715

Sacu_v1.1_s0036.g011715


Description : not classified & original description: CDS=378-2120


Gene families : OG0000522 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000522_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0036.g011715

Target Alias Description ECC score Gene Family Method Actions
Ala_g12209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14549 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04483 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Cba_g01296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12900 No alias MyoB class-I myosin receptor & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g10031 No alias MyoB class-IIIb myosin receptor & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g12427 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g24516 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g35014 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12958 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37830 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02102 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007656 GTD-bd 124 214
No external refs found!