Sacu_v1.1_s0036.g011631


Description : not classified & original description: CDS=1-762


Gene families : OG0000034 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0036.g011631
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Aev_g39132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31537 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g34513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25090 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g25437 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g25643 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g33484 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38093 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g64425 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g71001 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene00869.t1 Aspi01Gene00869 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05955.t1 Aspi01Gene05955 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07222.t1 Aspi01Gene07222 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene11444.t1 Aspi01Gene11444 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12255.t1 Aspi01Gene12255 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17487.t1 Aspi01Gene17487 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22780.t1 Aspi01Gene22780 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene37900.t1 Aspi01Gene37900 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55560.t1 Aspi01Gene55560 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64113.t1 Aspi01Gene64113 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008408 No alias not classified & original description: CDS=1-498 0.03 OrthoFinder output from all 47 species
Azfi_s0082.g038694 No alias not classified & original description: CDS=1-1581 0.03 OrthoFinder output from all 47 species
Cba_g77435 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g32617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g48526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g51462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g07941 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g08090 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20825 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g33360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60523 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08210 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18032 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25936 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g26569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g31299 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g33449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g64169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001357 No alias not classified & original description: CDS=1-645 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002067 No alias not classified & original description: CDS=1-666 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005710 No alias not classified & original description: CDS=1-1596 0.05 OrthoFinder output from all 47 species
Sam_g50216 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05519 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g07648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12058 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g25056 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26248 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g30550 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27819 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g43847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003852 2-isopropylmalate synthase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006551 leucine metabolic process IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
BP GO:0009098 leucine biosynthetic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032784 regulation of DNA-templated transcription elongation IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!