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  5. Sacu_v1.1_s0034.g011288

Sacu_v1.1_s0034.g011288


Description : not classified & original description: CDS=168-1793


Gene families : OG0006644 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006644_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0034.g011288

Target Alias Description ECC score Gene Family Method Actions
Adi_g106409 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12977 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g09005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59468.t1 Aspi01Gene59468 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre03.g207150 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g04006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_11480 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g40540.1 LOC_Os12g40540 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp8g15460.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Nbi_g06196 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06378 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g12951 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08446 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g04642 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06269 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc01g097160.3.1 Solyc01g097160 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g25783 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e003142_P002 Zm00001e003142 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004371 glycerone kinase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006071 glycerol metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019400 alditol metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!