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Description : not classified & original description: CDS=1-390
Gene families : OG0001479 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001479_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sacu_v1.1_s0024.g009205 | |
| Cluster | HCCA: Cluster_67 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Azfi_s0046.g030163 | No alias | not classified & original description: CDS=1-261 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0084.g039014 | No alias | not classified & original description: CDS=1-366 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0213.g058236 | No alias | not classified & original description: CDS=1-1527 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0008.g004232 | No alias | not classified & original description: CDS=1-1035 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0043.g012939 | No alias | not classified & original description: CDS=1-561 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0053.g014182 | No alias | not classified & original description: CDS=1-1209 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0083.g018163 | No alias | not classified & original description: CDS=1-234 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0086.g018445 | No alias | not classified & original description: CDS=1-456 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0088.g018605 | No alias | not classified & original description: CDS=1-207 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0113.g020845 | No alias | not classified & original description: CDS=1-675 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0141.g022742 | No alias | not classified & original description: CDS=1-243 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0177.g024623 | No alias | not classified & original description: CDS=1-423 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0235.g026545 | No alias | not classified & original description: CDS=1-819 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0739.g027664 | No alias | transcriptional co-regulator *(ZPR) & original... | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003852 | 2-isopropylmalate synthase activity | IEP | HCCA |
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | HCCA |
| MF | GO:0004527 | exonuclease activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0004813 | alanine-tRNA ligase activity | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006419 | alanyl-tRNA aminoacylation | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006551 | leucine metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | HCCA |
| BP | GO:0009081 | branched-chain amino acid metabolic process | IEP | HCCA |
| BP | GO:0009082 | branched-chain amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009098 | leucine biosynthetic process | IEP | HCCA |
| CC | GO:0009360 | DNA polymerase III complex | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0032784 | regulation of DNA-templated transcription elongation | IEP | HCCA |
| MF | GO:0034061 | DNA polymerase activity | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| CC | GO:0042575 | DNA polymerase complex | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0046912 | acyltransferase activity, acyl groups converted into alkyl on transfer | IEP | HCCA |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |