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  5. Sacu_v1.1_s0022.g008662

Sacu_v1.1_s0022.g008662 (SMT2, FRL1, CVP1)


Aliases : SMT2, FRL1, CVP1

Description : EC_2.1 transferase transferring one-carbon group & original description: CDS=1-1104


Gene families : OG0000656 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000656_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0022.g008662
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00095210 SMT1, CPH,... Lipid metabolism.phytosterols.campesterol... 0.02 OrthoFinder output from all 47 species
Adi_g021766 SMT2, FRL1, CVP1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Adi_g025874 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Als_g26801 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.01 OrthoFinder output from all 47 species
Aop_g01656 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Aop_g18802 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Cba_g71418 SMT2, FRL1, CVP1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ceric.1Z319200.1 SMT1, CPH, Ceric.1Z319200 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Dac_g25896 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Dde_g15360 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
LOC_Os11g19140.1 SMT1, CPH, LOC_Os11g19140 Cycloartenol-C-24-methyltransferase 1 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Msp_g11163 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Msp_g20580 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Nbi_g03588 SMT2, FRL1, CVP1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ppi_g13815 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Spa_g53536 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006694 steroid biosynthetic process IEA Interproscan
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013216 Methyltransf_11 137 232
IPR013705 Sterol_MeTrfase_C 301 363
No external refs found!