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  5. Sacu_v1.1_s0018.g007566

Sacu_v1.1_s0018.g007566


Description : light chain of clathrin triskelion & original description: CDS=99-1106


Gene families : OG0002188 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002188_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0018.g007566

Target Alias Description ECC score Gene Family Method Actions
Als_g08248 No alias light chain of clathrin triskelion & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.20G037000.1 Ceric.20G037000 light chain of clathrin triskelion & original... 0.03 OrthoFinder output from all 47 species
Ehy_g08290 No alias light chain of clathrin triskelion & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17820 No alias light chain of clathrin triskelion & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032845001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
Ore_g30776 No alias light chain of clathrin triskelion & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e041946_P001 Zm00001e041946 light chain of clathrin triskelion 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEA Interproscan
CC GO:0030132 clathrin coat of coated pit IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP HCCA
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP HCCA
BP GO:0006098 pentose-phosphate shunt IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006740 NADPH regeneration IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019107 myristoyltransferase activity IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0051156 glucose 6-phosphate metabolic process IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000996 Clathrin_L-chain 155 261
No external refs found!