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  5. Sacu_v1.1_s0014.g006263

Sacu_v1.1_s0014.g006263


Description : not classified & original description: CDS=1-678


Gene families : OG0004442 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004442_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0014.g006263
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g60790.1 LOC_Os03g60790 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g27546 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g38865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g13378 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g08798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004363 glutathione synthase activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006750 glutathione biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0019184 nonribosomal peptide biosynthetic process IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1904091 non-ribosomal peptide synthetase activity IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 41 102
No external refs found!