Sacu_v1.1_s0013.g005895 (GLR3.3, ATGLR3.3)

Aliases : GLR3.3, ATGLR3.3

Description : ligand-gated cation channel *(GLR) & original description: CDS=1387-4269

Gene families : OG0000075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0013.g005895

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00179820	GLR2.2,...	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
AMTR_s00019p00180640	GLR2.8,...	Solute transport.channels.GLR ligand-gated cation channel	0.02	OrthoFinder output from all 47 species
AMTR_s00019p00182440	GLR2.8,...	Solute transport.channels.GLR ligand-gated cation channel	0.02	OrthoFinder output from all 47 species
AMTR_s00019p00183450	GLR2.2,...	Solute transport.channels.GLR ligand-gated cation channel	0.02	OrthoFinder output from all 47 species
AMTR_s00021p00172130	GLR2.7,...	Solute transport.channels.GLR ligand-gated cation channel	0.02	OrthoFinder output from all 47 species
AMTR_s00021p00176450	ATGLR2.9,...	Solute transport.channels.GLR ligand-gated cation channel	0.02	OrthoFinder output from all 47 species
AMTR_s00062p00050250	GLUR3, GLR3.4,...	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
AMTR_s00062p00055860	GLR3.3,...	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
AT2G29110	GLR2.8, ATGLR2.8	glutamate receptor 2.8	0.02	OrthoFinder output from all 47 species
AT2G29120	GLR2.7, ATGLR2.7	glutamate receptor 2.7	0.02	OrthoFinder output from all 47 species
AT3G04110	ATGLR1.1, GLR1.1, GLR1	glutamate receptor 1.1	0.03	OrthoFinder output from all 47 species
AT4G31710	GLR2.4, ATGLR2.4	glutamate receptor 2.4	0.03	OrthoFinder output from all 47 species
Aev_g41610	GLR3.3, ATGLR3.3	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g04471	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g14918	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g26986	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g19413	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g06276	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g68675	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene41852.t1	GLR3.6,...	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene41854.t1	ATGLR3.5, GLR6,...	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene49372.t1	ATGLR3.5, GLR6,...	ligand-gated cation channel *(GLR) & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene49380.t1	ATGLR3.5, GLR6,...	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0027.g023528	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel *(GLR) & original...	0.04	OrthoFinder output from all 47 species
Azfi_s0132.g049186	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel *(GLR) & original...	0.03	OrthoFinder output from all 47 species
Cba_g32439	GLR3.6, ATGLR3.6	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.01G008000.1	GLUR3, GLR3.4,...	ligand-gated cation channel *(GLR) & original...	0.03	OrthoFinder output from all 47 species
Ceric.01G024600.1	GLUR3, GLR3.4,...	ligand-gated cation channel *(GLR) & original...	0.05	OrthoFinder output from all 47 species
Ceric.03G069800.1	GLUR3, GLR3.4,...	ligand-gated cation channel *(GLR) & original...	0.02	OrthoFinder output from all 47 species
Ceric.17G036400.1	GLR3.3,...	ligand-gated cation channel *(GLR) & original...	0.03	OrthoFinder output from all 47 species
Ceric.23G025600.1	GLR3.3,...	ligand-gated cation channel *(GLR) & original...	0.03	OrthoFinder output from all 47 species
Ceric.35G032300.1	GLR3.3,...	ligand-gated cation channel *(GLR) & original...	0.03	OrthoFinder output from all 47 species
Dac_g46260	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g14399	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g26350	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01014244001	GLR2.8, ATGLR2.8	Solute transport.channels.GLR ligand-gated cation channel	0.02	OrthoFinder output from all 47 species
GSVIVT01022297001	GLR3.6, ATGLR3.6	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
GSVIVT01030602001	GLUR3, GLR3.4, ATGLR3.4	Solute transport.channels.GLR ligand-gated cation channel	0.04	OrthoFinder output from all 47 species
GSVIVT01033132001	GLR2.8, ATGLR2.8	Solute transport.channels.GLR ligand-gated cation channel	0.01	OrthoFinder output from all 47 species
GSVIVT01033142001	GLR2.8, ATGLR2.8	Solute transport.channels.GLR ligand-gated cation channel	0.02	OrthoFinder output from all 47 species
GSVIVT01033155001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
GSVIVT01033163001	GLR2.7, ATGLR2.7	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
LOC_Os02g54640.1	ATGLR2.9,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Lfl_g07325	ATGLR3.5, GLR6, GLR3.5	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g08800	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_10426811g0010	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
MA_10427025g0010	ATGLR3.5, GLR6, GLR3.5	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
MA_10428186g0020	GLR3.3, ATGLR3.3	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
MA_37580g0010	ATGLR3.1, GLR2,...	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
MA_391859g0010	ATGLR3.2,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
MA_88153g0010	ATGLR3.1, GLR2,...	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
MA_958834g0010	ATGLR3.2,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Mp1g01040.1	GLR3.3, ATGLR3.3	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
Msp_g37768	ATGLR3.1, GLR2,...	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g41050	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g41082	ATGLR3.5, GLR6, GLR3.5	ligand-gated cation channel *(GLR) & original description: none	0.05	OrthoFinder output from all 47 species
Nbi_g24714	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g26213	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g30122	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel *(GLR) & original description: none	0.01	OrthoFinder output from all 47 species
Ppi_g32902	ATGLR3.5, GLR6, GLR3.5	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020221	ATGLR2.6, GLR2.6	ligand-gated cation channel *(GLR) & original...	0.03	OrthoFinder output from all 47 species
Sam_g11213	No alias	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g16302	No alias	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g28923	No alias	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g34015	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc06g063170.3.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Solyc06g063180.3.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Solyc06g063190.3.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Solyc06g063200.2.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Spa_g16090	ATGLR3.1, GLR2,...	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g24307	ATGLR3.1, GLR2,...	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g31279	ATGLR3.1, GLR2,...	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g31865	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g41455	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e013021_P001	GLUR3, GLR3.4,...	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
Zm00001e016079_P001	GLR2.8,...	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
Zm00001e023728_P001	GLR2.8,...	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022839	monoatomic ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
MF	GO:0005381	iron ion transmembrane transporter activity	IEP	HCCA
BP	GO:0005984	disaccharide metabolic process	IEP	HCCA
BP	GO:0005991	trehalose metabolic process	IEP	HCCA
BP	GO:0005992	trehalose biosynthetic process	IEP	HCCA
BP	GO:0006650	glycerophospholipid metabolic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006826	iron ion transport	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
MF	GO:0016307	phosphatidylinositol phosphate kinase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0032182	ubiquitin-like protein binding	IEP	HCCA
BP	GO:0034755	iron ion transmembrane transport	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA
MF	GO:0043130	ubiquitin binding	IEP	HCCA
BP	GO:0046351	disaccharide biosynthetic process	IEP	HCCA
BP	GO:0046486	glycerolipid metabolic process	IEP	HCCA
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	HCCA
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001828	ANF_lig-bd_rcpt	52	424
IPR001320	Iontro_rcpt_C	849	877
IPR001638	Solute-binding_3/MltF_N	562	848

External Links

No external refs found!

Sacu_v1.1_s0013.g005895 (GLR3.3, ATGLR3.3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation