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  5. Sacu_v1.1_s0006.g003011

Sacu_v1.1_s0006.g003011


Description : not classified & original description: CDS=1-1407


Gene families : OG0000402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0006.g003011
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene25981.t1 Aspi01Gene25981 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19220 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g13351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004814 arginine-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006420 arginyl-tRNA aminoacylation IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 145 187
IPR032308 TDBD 70 120
No external refs found!