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  5. Sacu_v1.1_s0002.g001047

Sacu_v1.1_s0002.g001047


Description : not classified & original description: CDS=58-897


Gene families : OG0005276 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005276_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0002.g001047
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Adi_g058804 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02122 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46497 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0157.g053785 No alias not classified & original description: CDS=31-933 0.03 OrthoFinder output from all 47 species
Dcu_g00955 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g05892 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12514 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09480 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!