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  5. Azfi_s0198.g057394

Azfi_s0198.g057394 (AtTLP8, TLP8)


Aliases : AtTLP8, TLP8

Description : TUB-type transcription factor & original description: CDS=825-1994


Gene families : OG0004261 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004261_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0198.g057394

Target Alias Description ECC score Gene Family Method Actions
AT1G16070 AtTLP8, TLP8 tubby like protein 8 0.03 OrthoFinder output from all 47 species
Ala_g31999 AtTLP8, TLP8 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G003600.1 AtTLP8, TLP8,... TUB-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ehy_g05592 AtTLP8, TLP8 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02076 AtTLP8, TLP8 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17397 AtTLP8, TLP8 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37411 AtTLP8, TLP8 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0031179 peptide modification IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR000007 Tubby_C 271 389
No external refs found!