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  5. Azfi_s0087.g042274

Azfi_s0087.g042274


Description : not classified & original description: CDS=207-755


Gene families : OG0006516 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006516_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0087.g042274
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AT1G09150 No alias pseudouridine synthase and archaeosine transglycosylase... 0.02 OrthoFinder output from all 47 species
Cre03.g168605 No alias Solute transport.channels.CorA family.MRS/MGT metal... 0.03 OrthoFinder output from all 47 species
Cre50.g761397 No alias No description available 0.03 OrthoFinder output from all 47 species
Mp2g00100.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR002478 PUA 170 199
IPR041366 Pre-PUA 75 163
No external refs found!