Description : polynucleotide kinase involved in ITS2 rRNA removal *(GRC3) & original description: none
Gene families : OG0006547 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006547_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aob_g20732 | No alias | polynucleotide kinase involved in ITS2 rRNA removal... | 0.04 | OrthoFinder output from all 47 species | |
Aop_g11094 | No alias | polynucleotide kinase involved in ITS2 rRNA removal... | 0.02 | OrthoFinder output from all 47 species | |
Cre03.g168350 | No alias | Polynucleotide 5-hydroxyl-kinase NOL9 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
Dac_g21136 | No alias | polynucleotide kinase involved in ITS2 rRNA removal... | 0.03 | OrthoFinder output from all 47 species | |
Len_g11686 | No alias | polynucleotide kinase involved in ITS2 rRNA removal... | 0.04 | OrthoFinder output from all 47 species | |
MA_132031g0010 | No alias | Polynucleotide 5-hydroxyl-kinase NOL9 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g27409 | No alias | polynucleotide kinase involved in ITS2 rRNA removal... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0002097 | tRNA wobble base modification | IEP | HCCA |
BP | GO:0002100 | tRNA wobble adenosine to inosine editing | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0004000 | adenosine deaminase activity | IEP | HCCA |
MF | GO:0004357 | glutamate-cysteine ligase activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0005049 | nuclear export signal receptor activity | IEP | HCCA |
MF | GO:0005543 | phospholipid binding | IEP | HCCA |
BP | GO:0006382 | adenosine to inosine editing | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006400 | tRNA modification | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | HCCA |
BP | GO:0008033 | tRNA processing | IEP | HCCA |
MF | GO:0008251 | tRNA-specific adenosine deaminase activity | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016553 | base conversion or substitution editing | IEP | HCCA |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
MF | GO:0016881 | acid-amino acid ligase activity | IEP | HCCA |
MF | GO:0019239 | deaminase activity | IEP | HCCA |
MF | GO:0032182 | ubiquitin-like protein binding | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
MF | GO:0035091 | phosphatidylinositol binding | IEP | HCCA |
BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
MF | GO:0043130 | ubiquitin binding | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140104 | molecular carrier activity | IEP | HCCA |
MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR032319 | CLP1_P | 164 | 367 |
No external refs found! |