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  5. Azfi_s0081.g038607

Azfi_s0081.g038607 (SUA)


Aliases : SUA

Description : not classified & original description: CDS=99-2927


Gene families : OG0002445 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002445_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0081.g038607
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00089100 SUA,... SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT3G54230 SUA suppressor of abi3-5 0.03 OrthoFinder output from all 47 species
Ala_g06676 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g37096 SUA not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene21507.t1 SUA, Aspi01Gene21507 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14899 SUA not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g07070.1 SUA, LOC_Os02g07070 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Lfl_g29782 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_188532g0010 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc08g077310.3.1 SUA, Solyc08g077310 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Tin_g13781 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e028204_P003 SUA, Zm00001e028204 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e033409_P006 SUA, Zm00001e033409 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0004371 glycerone kinase activity IEP HCCA
MF GO:0004652 polynucleotide adenylyltransferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006071 glycerol metabolic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
BP GO:0019400 alditol metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 288 343
IPR000504 RRM_dom 437 503
IPR041591 OCRE 575 624
No external refs found!