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Description : histone *(H3) & original description: CDS=1-621
Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Azfi_s0079.g038413 | |
| Cluster | HCCA: Cluster_46 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00009p00250010 | No alias | Chromatin organisation.histones.H3-type histone | 0.02 | OrthoFinder output from all 47 species | |
| AT5G65350 | HTR11 | histone 3 11 | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g014654 | No alias | histone *(H3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g11605 | No alias | histone *(H3) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g01156 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g12785 | No alias | histone H3 variant *(CENH3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene14635.t1 | Aspi01Gene14635 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.27G029000.1 | Ceric.27G029000 | histone *(H3) & original description: pacid=50605580... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.37G016300.1 | Ceric.37G016300 | histone *(H3) & original description: pacid=50616425... | 0.01 | OrthoFinder output from all 47 species | |
| Cre06.g264650 | No alias | Chromatin organisation.histones.H3-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre06.g265500 | No alias | Chromatin organisation.histones.H3-type histone | 0.02 | OrthoFinder output from all 47 species | |
| Cre06.g266650 | No alias | Chromatin organisation.histones.H3-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre06.g274850 | No alias | Chromatin organisation.histones.H3-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre06.g275750 | No alias | Chromatin organisation.histones.H3-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre12.g504650 | No alias | Chromatin organisation.histones.H3-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre12.g504800 | No alias | Chromatin organisation.histones.H3-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre12.g505500 | No alias | Chromatin organisation.histones.H3-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre12.g506300 | No alias | Chromatin organisation.histones.H3-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre12.g506500 | No alias | Chromatin organisation.histones.H3-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre17.g708150 | No alias | Chromatin organisation.histones.H3-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre17.g709050 | No alias | Chromatin organisation.histones.H3-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g24157 | No alias | histone *(H3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Gb_15586 | No alias | histone (H3) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_30564 | No alias | histone (H3) | 0.01 | OrthoFinder output from all 47 species | |
| Gb_36661 | No alias | histone (H3) | 0.02 | OrthoFinder output from all 47 species | |
| MA_113838g0010 | No alias | histone (H3) | 0.02 | OrthoFinder output from all 47 species | |
| MA_56411g0010 | No alias | histone (H3) | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g09090.1 | No alias | histone (H3) | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c24_13230V3.1 | Pp3c24_13230 | Histone superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0017.g007202 | No alias | not classified & original description: CDS=224-661 | 0.04 | OrthoFinder output from all 47 species | |
| Smo103546 | No alias | Chromatin organisation.histones.H3-type histone | 0.02 | OrthoFinder output from all 47 species | |
| Smo78992 | No alias | Chromatin organisation.histones.H3-type histone | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g056540.1.1 | Solyc12g056540 | histone (H3) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g14563 | No alias | histone H3 variant *(CENH3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g52464 | No alias | histone *(H3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e008155_P001 | Zm00001e008155 | histone (H3) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e008160_P001 | Zm00001e008160 | histone (H3) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e016861_P001 | Zm00001e016861 | histone (H3) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e019170_P001 | Zm00001e019170 | histone (H3) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003682 | chromatin binding | IEP | HCCA |
| MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | HCCA |
| MF | GO:0004427 | inorganic diphosphate phosphatase activity | IEP | HCCA |
| BP | GO:0006417 | regulation of translation | IEP | HCCA |
| BP | GO:0006448 | regulation of translational elongation | IEP | HCCA |
| BP | GO:0006449 | regulation of translational termination | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| MF | GO:0008942 | nitrite reductase [NAD(P)H] activity | IEP | HCCA |
| BP | GO:0009719 | response to endogenous stimulus | IEP | HCCA |
| BP | GO:0009725 | response to hormone | IEP | HCCA |
| BP | GO:0009733 | response to auxin | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0009891 | positive regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0009893 | positive regulation of metabolic process | IEP | HCCA |
| BP | GO:0010033 | response to organic substance | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | HCCA |
| BP | GO:0010628 | positive regulation of gene expression | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016661 | oxidoreductase activity, acting on other nitrogenous compounds as donors | IEP | HCCA |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0034248 | regulation of amide metabolic process | IEP | HCCA |
| BP | GO:0034250 | positive regulation of amide metabolic process | IEP | HCCA |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | HCCA |
| MF | GO:0043022 | ribosome binding | IEP | HCCA |
| BP | GO:0043243 | positive regulation of protein-containing complex disassembly | IEP | HCCA |
| BP | GO:0043244 | regulation of protein-containing complex disassembly | IEP | HCCA |
| MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
| BP | GO:0045727 | positive regulation of translation | IEP | HCCA |
| BP | GO:0045901 | positive regulation of translational elongation | IEP | HCCA |
| BP | GO:0045905 | positive regulation of translational termination | IEP | HCCA |
| MF | GO:0046857 | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor | IEP | HCCA |
| BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
| BP | GO:0048522 | positive regulation of cellular process | IEP | HCCA |
| BP | GO:0051128 | regulation of cellular component organization | IEP | HCCA |
| BP | GO:0051130 | positive regulation of cellular component organization | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0051247 | positive regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0098809 | nitrite reductase activity | IEP | HCCA |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007125 | Histone_H2A/H2B/H3 | 71 | 202 |
| No external refs found! |