- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Vegetative Sporophyte | Adult Sporophyte | Leaf (0 mg/L NH4NO3) | Leaf (30 mg/L NH4NO3) | Leaf (90 mg/L NH4NO3) | Sporophyte; w/o NH4NO3, w/o cyanobacteria | Sporophyte; w/o NH4NO3, w cyanobacteria | Sporophyte; w NH4NO3, w cyanobacteria | Sporophyte; w NH4NO3, w/o cyanobacteria | Root Tip, D-3 6h mock treated | Root Tip, D-3 6h 0.1 uM IAA treated | Root Tip, D-3 6h 0.5 uM trans-zeatin treated | Microsporocarp |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Azfi_s0001.g000195 (RPOB) | 2.05 | 1.79 | -1.06 | 0.61 | -1.22 | -0.04 | -1.8 | -1.95 | -0.24 | -5.66 | -4.96 | -4.99 | -0.93 |
Azfi_s0001.g000218 (LOF1) | 1.67 | 0.85 | -1.31 | -1.46 | -1.65 | -0.68 | -1.29 | -2.03 | -0.86 | 0.63 | 0.45 | 0.09 | 0.17 |
Azfi_s0001.g000331 (TT7) | 3.22 | -7.6 | -5.75 | -5.25 | -4.54 | -7.22 | -6.6 | - | - | - | - | - | 1.84 |
Azfi_s0001.g000812 (SAR1) | 1.56 | -3.56 | -0.73 | -0.48 | -0.6 | -0.19 | -0.38 | -0.4 | -0.46 | 0.07 | 0.09 | 0.05 | 0.76 |
| 1.66 | -4.68 | -0.69 | 0.28 | -0.33 | -0.14 | 0.29 | 0.42 | 0.02 | -0.33 | -0.31 | -0.39 | -1.62 | |
| 1.11 | -0.17 | -0.88 | -0.8 | -1.23 | 0.49 | 0.79 | 0.84 | 0.71 | -1.25 | -1.14 | -1.07 | -0.99 | |
Azfi_s0003.g007457 (PHR1) | 1.7 | 0.55 | -1.17 | -1.52 | -1.09 | 0.45 | 0.33 | 0.25 | 0.9 | -1.88 | -1.88 | -1.82 | -0.94 |
| 0.69 | -0.34 | -0.25 | -0.1 | 0.33 | 0.08 | 0.12 | 0.17 | 0.43 | -0.08 | -0.19 | -0.13 | -2.26 | |
| 1.54 | -0.95 | 0.56 | 0.51 | 0.6 | -0.37 | -0.46 | -0.5 | -0.23 | -1.31 | -1.54 | -1.65 | 0.04 | |
Azfi_s0005.g009119 (MYB50) | 1.91 | -1.66 | -1.26 | -1.45 | -0.11 | -5.58 | -5.11 | -6.6 | -6.28 | 1.32 | 0.95 | 1.37 | -2.86 |
| 2.07 | -1.14 | -1.29 | -0.74 | -0.76 | -0.39 | -0.03 | 0.17 | 0.3 | -0.29 | -0.34 | -0.23 | -2.41 | |
Azfi_s0007.g010932 (REME1) | 2.72 | -3.34 | -0.11 | 0.24 | 1.06 | -2.54 | -2.03 | -1.92 | -1.33 | -1.35 | -2.22 | -3.76 | -1.45 |
Azfi_s0008.g011642 (GSR 1) | 1.64 | -2.04 | 1.45 | 1.39 | 0.75 | -5.29 | -1.87 | -1.21 | -0.4 | -1.77 | -1.84 | -1.54 | -2.37 |
Azfi_s0009.g011773 (ATY53) | 1.91 | 1.47 | -2.04 | -2.58 | -1.5 | 0.22 | -0.53 | -1.05 | -0.36 | -0.4 | -0.5 | -0.33 | -1.58 |
| 1.08 | -0.77 | -0.37 | 0.2 | 0.23 | -1.14 | -1.29 | -1.33 | -1.26 | 0.73 | 0.59 | 0.74 | -0.51 | |
| 1.08 | -2.17 | -0.1 | 0.08 | 0.26 | -0.07 | -0.33 | -0.48 | -0.12 | 0.14 | 0.15 | 0.14 | -0.39 | |
Azfi_s0013.g013277 (ZFN1) | 0.43 | -0.31 | -0.0 | -0.23 | 0.26 | 0.47 | 0.1 | -0.13 | 0.29 | -0.2 | -0.13 | -0.13 | -1.01 |
| 0.88 | -3.02 | 0.12 | 0.96 | 0.29 | -0.84 | -0.71 | -0.48 | -0.67 | 0.43 | 0.38 | 0.4 | -1.72 | |
| 2.3 | -1.16 | 1.32 | -0.07 | 0.0 | -0.52 | -0.33 | -0.66 | -0.76 | -2.29 | -3.89 | -5.36 | -2.56 | |
Azfi_s0019.g015298 (SEU) | 1.15 | 1.07 | -0.78 | -0.67 | -0.65 | -0.13 | -0.26 | -0.34 | -0.01 | -0.43 | -0.47 | -0.37 | 0.09 |
Azfi_s0024.g020421 (TGA2) | 1.28 | -0.63 | -1.69 | -1.61 | -0.98 | -0.09 | 0.01 | 0.02 | 0.47 | 0.21 | 0.45 | 0.43 | -0.82 |
Azfi_s0027.g023506 (EIF5A) | 1.87 | -0.07 | -0.87 | -0.59 | -0.8 | -0.16 | -0.23 | -0.15 | -0.21 | 0.03 | -0.04 | -0.08 | -2.95 |
Azfi_s0028.g023780 (CA4) | 2.21 | -2.57 | -1.6 | -0.91 | -0.75 | 2.04 | -2.54 | -4.42 | 1.01 | -2.72 | -3.06 | -3.05 | - |
Azfi_s0040.g026638 (MBAC1) | 1.75 | -2.89 | 0.53 | 0.68 | 0.62 | -0.87 | -0.89 | -0.98 | -0.68 | -0.49 | -0.53 | -0.5 | -0.78 |
Azfi_s0049.g030694 (ATB BETA) | 0.92 | -3.29 | -0.52 | -0.23 | 0.1 | 0.31 | 0.21 | 0.13 | 0.33 | 0.14 | -0.02 | 0.2 | -1.35 |
| 2.85 | 0.6 | -1.76 | -1.63 | -1.72 | -0.56 | -0.75 | -0.98 | -0.57 | -2.43 | -2.43 | -2.3 | -1.65 | |
Azfi_s0051.g031243 (MINE1) | 1.7 | -2.65 | -1.18 | -1.08 | -1.32 | 0.43 | 0.77 | 0.87 | 0.82 | -1.3 | -1.35 | -1.23 | -1.26 |
| 2.23 | -2.48 | -1.35 | -0.66 | -0.99 | 0.42 | 0.52 | 0.48 | 0.3 | -1.68 | -1.78 | -1.74 | -1.74 | |
| 1.89 | -0.66 | -1.58 | -1.54 | -0.88 | -0.36 | -0.22 | -0.21 | 0.08 | 0.21 | 0.07 | 0.14 | -0.81 | |
| 2.8 | -0.34 | -1.72 | -1.73 | -1.19 | -1.61 | -1.92 | -1.88 | -2.09 | 0.09 | 0.03 | -0.0 | -6.38 | |
| 1.42 | -0.78 | -0.25 | 0.49 | -0.1 | 0.5 | 0.51 | 0.66 | 0.76 | -3.29 | -3.09 | -3.02 | -3.14 | |
| 3.44 | -1.72 | -2.09 | -0.93 | -1.67 | -3.26 | -3.68 | -3.74 | -4.21 | -2.75 | -3.43 | -2.85 | -3.62 | |
| 1.52 | -2.02 | -0.43 | 0.68 | 0.23 | -0.93 | -0.26 | -0.2 | -0.88 | -0.11 | 0.09 | -0.06 | -0.61 | |
Azfi_s0085.g039102 (RPB2) | 1.09 | -1.13 | 0.15 | 0.23 | 0.59 | -0.29 | -0.27 | -0.26 | 0.04 | -0.12 | -0.22 | -0.05 | -1.44 |
| 1.2 | -2.27 | 0.35 | 0.28 | 0.42 | -0.63 | -0.36 | -0.22 | -0.26 | 0.05 | 0.01 | 0.05 | -1.08 | |
| 2.13 | -0.54 | -1.94 | -1.78 | -1.75 | -0.15 | 0.05 | 0.08 | 0.01 | -0.34 | -0.24 | -0.04 | -1.11 | |
| 3.28 | -0.94 | - | -0.41 | - | -1.2 | -1.29 | -2.27 | - | - | -0.88 | -1.19 | - | |
| 0.72 | -3.12 | 0.25 | 0.33 | 0.36 | -0.45 | -0.31 | -0.24 | -0.04 | 0.02 | -0.0 | 0.15 | 0.05 | |
| 1.54 | -0.09 | -0.92 | -0.07 | -0.27 | -1.26 | -1.09 | -0.87 | -1.32 | 0.78 | 0.49 | 0.69 | -1.93 | |
| 2.31 | -0.57 | 0.04 | 0.11 | -0.45 | -0.92 | -1.36 | -1.31 | -0.55 | -0.7 | -0.81 | -0.7 | -0.5 | |
| 3.56 | -25.01 | - | -13.68 | - | - | 0.27 | - | -24.34 | - | - | - | - | |
| 1.54 | 1.48 | -0.26 | -0.81 | -0.54 | 0.76 | 0.1 | -0.1 | 0.11 | -4.76 | -4.2 | -4.15 | -1.85 | |
Azfi_s0170.g055593 (SAM2) | 2.11 | -2.64 | -0.64 | -1.03 | 0.12 | -2.01 | -2.7 | -2.7 | -2.24 | 0.81 | 0.68 | 0.76 | -1.03 |
| 2.47 | -2.37 | -0.4 | 1.28 | -0.61 | -0.43 | -1.18 | -1.76 | -0.37 | -4.31 | -4.1 | -4.19 | 0.02 | |
Azfi_s0173.g055767 (SPL3) | 1.71 | 0.92 | -0.51 | -0.39 | -0.37 | 0.03 | 0.2 | 0.39 | 0.1 | -6.82 | -8.4 | -8.37 | 0.06 |
| 1.34 | -5.66 | -0.19 | 0.45 | -0.3 | -0.05 | 0.08 | 0.05 | -0.26 | -0.29 | -0.24 | -0.36 | 0.06 | |
| 2.9 | -0.89 | -1.74 | -1.65 | -2.18 | -1.15 | -0.4 | 0.04 | -0.88 | -2.16 | -2.25 | -2.16 | -0.49 | |
Azfi_s0200.g057525 (SK13) | 2.1 | 0.03 | -1.22 | -1.64 | -1.22 | -0.34 | -0.25 | -0.16 | 0.19 | -0.21 | -0.17 | -0.16 | -2.31 |
| 3.12 | -3.02 | -0.81 | -1.81 | -1.36 | -1.26 | -1.26 | -1.13 | -1.16 | -3.4 | -3.51 | -3.46 | -0.09 | |
| 2.61 | -3.05 | 0.1 | 0.03 | 0.76 | -2.5 | -1.7 | -1.71 | -2.07 | -1.11 | -1.53 | -0.65 | -0.91 | |
| 3.27 | -3.18 | -2.09 | -1.88 | -1.17 | -1.85 | -1.86 | -1.86 | -1.53 | -1.53 | -1.66 | -1.51 | -3.45 | |
Azfi_s0241.g059726 (P44) | 1.77 | -1.78 | -0.92 | -0.32 | -0.58 | -0.86 | 0.07 | 0.08 | 0.36 | -0.14 | -0.06 | -0.0 | -1.01 |
Azfi_s0264.g060934 (BRN2) | 1.65 | 0.29 | -0.05 | 0.18 | -0.01 | -0.31 | -0.16 | 0.06 | -0.44 | -1.46 | -0.63 | -1.13 | -0.71 |
Azfi_s0296.g063538 (DSO) | 2.35 | -0.67 | 0.85 | -0.47 | 0.38 | -0.43 | -0.28 | -0.2 | -0.42 | -5.37 | -5.6 | -5.18 | -2.49 |
Azfi_s0336.g065538 (SK13) | 3.45 | -0.56 | -2.14 | - | -3.04 | - | -1.8 | -3.47 | -1.78 | - | -3.33 | -2.02 | - |
Azfi_s0366.g066969 (emb2411) | 2.38 | -0.06 | -1.04 | -0.77 | -0.53 | -1.94 | -1.98 | -1.81 | -1.66 | -0.66 | -1.13 | -0.71 | 1.18 |
Azfi_s0371.g067133 (CPK28) | 1.39 | - | 0.06 | 0.38 | 0.38 | -0.37 | -0.57 | -0.62 | -0.2 | 0.08 | 0.12 | 0.17 | -0.99 |
| 3.06 | -1.4 | -1.17 | 0.36 | -1.29 | -2.1 | -2.47 | -2.33 | -2.56 | -2.26 | -2.21 | -2.5 | -0.43 | |
| 1.14 | -0.92 | -0.13 | 0.29 | 0.38 | 0.12 | -0.02 | -0.06 | -0.06 | -0.38 | -0.53 | -0.47 | -0.65 | |
| 1.93 | -2.74 | -0.71 | -0.19 | -0.43 | -0.41 | -0.21 | -0.08 | -0.17 | 0.1 | 0.05 | -0.06 | -1.81 | |
Azfi_s0451.g070778 (PPa6) | 3.2 | -4.11 | -1.68 | -1.98 | -1.74 | -1.03 | -1.0 | -0.81 | -1.1 | -1.91 | -2.0 | -1.96 | -3.93 |
Azfi_s0506.g073977 (WNK1) | 1.23 | -2.37 | 0.06 | 0.32 | 0.42 | -0.61 | -0.93 | -1.02 | -0.77 | -0.31 | -0.09 | -0.13 | 0.93 |
Azfi_s0678.g081838 (TUB6) | 2.96 | -2.31 | -2.53 | -1.29 | -2.16 | -1.26 | -1.31 | -1.12 | -1.63 | -0.75 | -0.95 | -0.84 | -0.08 |
Azfi_s0725.g083832 (XIK) | 1.38 | 0.72 | -1.1 | -0.75 | -0.17 | -0.51 | -0.53 | -0.41 | 0.17 | 0.18 | 0.22 | 0.2 | -3.61 |
| 1.6 | -2.71 | -0.43 | -0.75 | -0.29 | -0.41 | -0.65 | -0.86 | -0.78 | 0.56 | 0.53 | 0.58 | -0.47 | |
Azfi_s0743.g084789 (AK-HSDH) | 1.23 | -2.36 | -0.07 | -0.24 | 0.15 | -0.83 | 0.04 | -0.02 | -0.1 | 0.32 | 0.19 | 0.23 | -1.09 |
| 3.63 | -4.47 | -4.7 | -4.53 | -4.51 | -4.6 | -4.08 | -3.96 | -4.37 | -3.92 | -3.99 | -3.97 | -5.52 | |
Azfi_s0899.g091749 (ATS) | 3.01 | 0.09 | -3.3 | -3.51 | -3.52 | -0.4 | -0.52 | -0.5 | -0.46 | -10.08 | -8.89 | - | -0.44 |
| 1.05 | 0.0 | 0.6 | 0.09 | 0.22 | -0.41 | 0.32 | 0.65 | 0.95 | -2.54 | -3.51 | -2.82 | -1.88 | |
Azfi_s1327.g101580 (NSI) | 3.57 | -0.76 | - | - | - | - | - | - | -0.83 | - | - | - | - |
| 1.0 | -0.79 | 0.61 | 0.61 | 0.95 | -0.55 | 0.15 | 0.24 | -0.24 | -1.37 | -1.32 | -1.41 | -1.13 | |
| 1.53 | -4.58 | 2.01 | 1.67 | 1.24 | -3.57 | -2.39 | -5.19 | -4.57 | - | - | -5.2 | -2.91 | |
| 2.34 | 0.33 | - | - | - | -10.79 | -10.29 | -10.47 | -15.33 | - | 0.65 | - | 2.36 | |
Azfi_s3086.g114483 (CUTA) | 1.01 | -1.31 | -2.37 | -2.34 | -2.13 | 0.36 | 0.47 | 0.52 | 0.93 | -0.26 | -0.57 | -0.37 | 0.75 |
| 3.55 | - | - | - | - | - | - | - | - | - | - | 0.41 | - | |
| 3.34 | -11.39 | -2.61 | -2.05 | -1.91 | -3.36 | -3.43 | -3.29 | -2.96 | -0.72 | -0.82 | -0.78 | -6.34 | |
Azfi_s3783.g116888 (SUS2) | 1.15 | -1.33 | -0.31 | -0.28 | -0.07 | -0.29 | -0.4 | -0.5 | -0.17 | 0.46 | 0.26 | 0.42 | -0.45 |
Azfi_s3975.g117444 (SPK1) | 1.57 | -4.2 | 1.71 | 1.68 | 1.31 | - | - | - | - | -0.36 | -2.99 | -2.9 | -26.22 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.