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  5. Azfi_s0045.g029908

Azfi_s0045.g029908 (emb1579)


Aliases : emb1579

Description : not classified & original description: CDS=223-3273


Gene families : OG0003544 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003544_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0045.g029908

Target Alias Description ECC score Gene Family Method Actions
Aev_g47806 emb1579 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12039 emb1579 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g21996 emb1579 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G096000.1 emb1579, Ceric.12G096000 not classified & original description: pacid=50600642... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000863.29 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre06.g283634 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g09040 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17106 emb1579 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14277 emb1579 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16958 emb1579 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp7g18160.1 emb1579 no description available(sp|f4is91|rsa1_arath : 184.0) 0.03 OrthoFinder output from all 47 species
Ppi_g02395 emb1579 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g008680.4.1 emb1579, Solyc04g008680 no description available(sp|f4is91|rsa1_arath : 275.0) 0.04 OrthoFinder output from all 47 species
Zm00001e030655_P003 emb1579, Zm00001e030655 no description available(sp|f4is91|rsa1_arath : 304.0) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP HCCA
BP GO:0046855 inositol phosphate dephosphorylation IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0071545 inositol phosphate catabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR045353 LAIKA 752 816
IPR045354 BURAN 384 469
IPR025954 DBC1/CARP1_inactive_NUDIX_dom 488 604
No external refs found!