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  5. Azfi_s0041.g026753

Azfi_s0041.g026753


Description : associated component *(SAP18) of histone deacetylase machineries & original description: CDS=1-273


Gene families : OG0004148 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004148_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0041.g026753
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Adi_g042559 ATSAP18, SAP18 associated component *(SAP18) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Cre09.g404400 ATSAP18, SAP18 Chromatin organisation.histone modifications.histone... 0.01 OrthoFinder output from all 47 species
Spa_g17186 ATSAP18, SAP18 associated component *(SAP18) of histone deacetylase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000313 organellar ribosome IEP HCCA
CC GO:0000439 transcription factor TFIIH core complex IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004807 triose-phosphate isomerase activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005761 mitochondrial ribosome IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA

No InterPro domains available for this sequence

No external refs found!