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  5. Azfi_s0032.g024976

Azfi_s0032.g024976


Description : EC_4.1 carbon-carbon lyase & original description: CDS=226-1710


Gene families : OG0004402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004402_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0032.g024976
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00128310 evm_27.TU.AmTr_v1... Amino acid metabolism.biosynthesis.aspartate... 0.03 OrthoFinder output from all 47 species
AT3G14390 No alias Pyridoxal-dependent decarboxylase family protein 0.03 OrthoFinder output from all 47 species
MA_10426527g0020 No alias diaminopimelate decarboxylase 0.02 OrthoFinder output from all 47 species
Nbi_g13729 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Smo182543 No alias Amino acid metabolism.biosynthesis.aspartate... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
InterPro domains Description Start Stop
IPR022643 De-COase2_C 358 448
IPR022644 De-COase2_N 111 357
No external refs found!