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  5. Azfi_s0031.g024539

Azfi_s0031.g024539 (RPL22)


Aliases : RPL22

Description : not classified & original description: CDS=1-555


Gene families : OG0008579 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008579_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0031.g024539
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
ATCG00810 RPL22 ribosomal protein L22 0.06 OrthoFinder output from all 47 species
Aev_g00527 RPL22 component *(uL22c) of large plastid ribosomal-subunit... 0.14 OrthoFinder output from all 47 species
Ceric.05G042500.1 RPL22, Ceric.05G042500 component *(uL22c) of large plastid ribosomal-subunit... 0.13 OrthoFinder output from all 47 species
Ceric.1Z020100.1 Ceric.1Z020100 component *(uL22c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Ceric.29G004500.1 RPL22, Ceric.29G004500 component *(uL22c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ceric.38G009300.1 RPL22, Ceric.38G009300 component *(uL22c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
LOC_Os04g16822.1 RPL22, LOC_Os04g16822 component psRPL22 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
LOC_Os08g15268.1 RPL22, LOC_Os08g15268 component psRPL22 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Lfl_g13571 RPL22 component *(uL22c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ore_g00408 RPL22 component *(uL22c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Zm00001e042088_P001 RPL22, Zm00001e042088 50S ribosomal protein L22, chloroplastic OS=Zea mays... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001063 Ribosomal_L22 13 96
No external refs found!