Description : basal transcription factor *(TFIa/RRN3) & original description: CDS=183-1904
Gene families : OG0004620 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004620_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Azfi_s0006.g010018 | |
Cluster | HCCA: Cluster_6 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ceric.13G084500.1 | Ceric.13G084500 | basal transcription factor *(TFIa/RRN3) & original... | 0.04 | OrthoFinder output from all 47 species | |
Gb_32274 | No alias | basal transcription factor (TFIa/RRN3) | 0.05 | OrthoFinder output from all 47 species | |
Mp6g17000.1 | No alias | basal transcription factor (TFIa/RRN3) | 0.03 | OrthoFinder output from all 47 species | |
Msp_g32137 | No alias | basal transcription factor *(TFIa/RRN3) & original... | 0.04 | OrthoFinder output from all 47 species | |
Tin_g12181 | No alias | basal transcription factor *(TFIa/RRN3) & original... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0001181 | RNA polymerase I general transcription initiation factor activity | IEA | Interproscan |
BP | GO:0006361 | transcription initiation at RNA polymerase I promoter | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | HCCA |
BP | GO:0006265 | DNA topological change | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
BP | GO:0071103 | DNA conformation change | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007991 | RNA_pol_I_trans_ini_fac_RRN3 | 92 | 562 |
No external refs found! |