Azfi_s0003.g007465


Description : component *(bS21c) of small plastid ribosomal-subunit proteome & original description: CDS=1-450


Gene families : OG0004103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004103_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0003.g007465

Target Alias Description ECC score Gene Family Method Actions
AT3G27160 GHS1 Ribosomal protein S21 family protein 0.11 OrthoFinder output from all 47 species
Adi_g007754 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aev_g09196 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Als_g01448 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Aob_g02683 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Aop_g18482 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Cba_g08732 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ceric.13G030700.1 Ceric.13G030700 component *(bS21c) of small plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Cre01.g017300 No alias Protein biosynthesis.organelle translation... 0.11 OrthoFinder output from all 47 species
Dac_g01906 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Dcu_g41032 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Dde_g05601 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Ehy_g00353 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
LOC_Os02g09590.1 GHS1, LOC_Os02g09590 component mtRPS21|psRPS21 of mitochondrial ribosome... 0.1 OrthoFinder output from all 47 species
Len_g15740 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Lfl_g02717 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
MA_249305g0010 No alias component mtRPS21|psRPS21 of mitochondrial ribosome... 0.05 OrthoFinder output from all 47 species
Mp4g21580.1 No alias component mtRPS21|psRPS21 of mitochondrial ribosome... 0.17 OrthoFinder output from all 47 species
Msp_g36586 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Nbi_g05106 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Ore_g01870 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Ore_g05303 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Pir_g59325 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ppi_g01614 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007775 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.14 OrthoFinder output from all 47 species
Smo444102 No alias Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
Solyc02g068090.3.1 GHS1, Solyc02g068090 component mtRPS21|psRPS21 of mitochondrial ribosome... 0.07 OrthoFinder output from all 47 species
Spa_g18473 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Tin_g07965 No alias component *(bS21c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Zm00001e013920_P001 GHS1, Zm00001e013920 component mtRPS21|psRPS21 of mitochondrial ribosome... 0.02 OrthoFinder output from all 47 species
Zm00001e025066_P001 GHS1, Zm00001e025066 component mtRPS21|psRPS21 of mitochondrial ribosome... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009512 cytochrome b6f complex IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!