Description : component *(bS21c) of small plastid ribosomal-subunit proteome & original description: CDS=1-450
Gene families : OG0004103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004103_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G27160 | GHS1 | Ribosomal protein S21 family protein | 0.11 | OrthoFinder output from all 47 species | |
Adi_g007754 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Aev_g09196 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
Als_g01448 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
Aob_g02683 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.09 | OrthoFinder output from all 47 species | |
Aop_g18482 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Cba_g08732 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.13G030700.1 | Ceric.13G030700 | component *(bS21c) of small plastid ribosomal-subunit... | 0.1 | OrthoFinder output from all 47 species | |
Cre01.g017300 | No alias | Protein biosynthesis.organelle translation... | 0.11 | OrthoFinder output from all 47 species | |
Dac_g01906 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g41032 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
Dde_g05601 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
Ehy_g00353 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os02g09590.1 | GHS1, LOC_Os02g09590 | component mtRPS21|psRPS21 of mitochondrial ribosome... | 0.1 | OrthoFinder output from all 47 species | |
Len_g15740 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
Lfl_g02717 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
MA_249305g0010 | No alias | component mtRPS21|psRPS21 of mitochondrial ribosome... | 0.05 | OrthoFinder output from all 47 species | |
Mp4g21580.1 | No alias | component mtRPS21|psRPS21 of mitochondrial ribosome... | 0.17 | OrthoFinder output from all 47 species | |
Msp_g36586 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g05106 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.09 | OrthoFinder output from all 47 species | |
Ore_g01870 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
Ore_g05303 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.09 | OrthoFinder output from all 47 species | |
Pir_g59325 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g01614 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0019.g007775 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.14 | OrthoFinder output from all 47 species | |
Smo444102 | No alias | Protein biosynthesis.organelle translation... | 0.05 | OrthoFinder output from all 47 species | |
Solyc02g068090.3.1 | GHS1, Solyc02g068090 | component mtRPS21|psRPS21 of mitochondrial ribosome... | 0.07 | OrthoFinder output from all 47 species | |
Spa_g18473 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
Tin_g07965 | No alias | component *(bS21c) of small plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e013920_P001 | GHS1, Zm00001e013920 | component mtRPS21|psRPS21 of mitochondrial ribosome... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e025066_P001 | GHS1, Zm00001e025066 | component mtRPS21|psRPS21 of mitochondrial ribosome... | 0.08 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006414 | translational elongation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0008324 | monoatomic cation transmembrane transporter activity | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
CC | GO:0009512 | cytochrome b6f complex | IEP | HCCA |
CC | GO:0009521 | photosystem | IEP | HCCA |
CC | GO:0009523 | photosystem II | IEP | HCCA |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0010109 | regulation of photosynthesis | IEP | HCCA |
BP | GO:0010207 | photosystem II assembly | IEP | HCCA |
MF | GO:0010242 | oxygen evolving activity | IEP | HCCA |
MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
BP | GO:0015979 | photosynthesis | IEP | HCCA |
BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0042548 | regulation of photosynthesis, light reaction | IEP | HCCA |
BP | GO:0042549 | photosystem II stabilization | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043467 | regulation of generation of precursor metabolites and energy | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | HCCA |
BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
CC | GO:0070069 | cytochrome complex | IEP | HCCA |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
CC | GO:0098796 | membrane protein complex | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
CC | GO:1902494 | catalytic complex | IEP | HCCA |
CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |