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  5. Azfi_s0001.g000888

Azfi_s0001.g000888 (GCH, ATGCH, RFD1, ATRIBA1)


Aliases : GCH, ATGCH, RFD1, ATRIBA1

Description : EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond & original description: CDS=193-1728


Gene families : OG0001684 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001684_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0001.g000888
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
Adi_g013021 GCH, ATGCH, RFD1, ATRIBA1 EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species
Dac_g12652 GCH, ATGCH, RFD1, ATRIBA1 EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species
GSVIVT01003433001 GCH, ATGCH, RFD1, ATRIBA1 Coenzyme metabolism.FMN/FAD biosynthesis.bifunctional... 0.03 OrthoFinder output from all 47 species
LOC_Os05g38570.1 LOC_Os05g38570 Probable monofunctional riboflavin biosynthesis protein... 0.04 OrthoFinder output from all 47 species
Len_g07419 GCH, ATGCH, RFD1, ATRIBA1 EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species
Ore_g07401 GCH, ATGCH, RFD1, ATRIBA1 EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
Pir_g10851 GCH, ATGCH, RFD1, ATRIBA1 EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.06 OrthoFinder output from all 47 species
Solyc11g010300.2.1 GCH, ATGCH,... bifunctional GTP cyclohydrolase II (RibA) and DHBP... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEA Interproscan
BP GO:0009231 riboflavin biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR032677 GTP_cyclohydro_II 290 455
IPR000422 DHBP_synthase_RibB 103 279
No external refs found!