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Aliases : PSBE, Ceric.38G007300
Description : component alpha *(PsbE) of PS-II cytochrome b559 heterodimer & original description: pacid=50580608 polypeptide=Ceric.38G007300.1.p locus=Ceric.38G007300 ID=Ceric.38G007300.1.v2.1 annot-version=v2.1
Gene families : OG0009554 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009554_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ceric.38G007300.1 | |
| Cluster | HCCA: Cluster_100 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00334p00011530 | PSBE,... | Photosynthesis.photophosphorylation.photosystem II.PS-II... | 0.06 | OrthoFinder output from all 47 species | |
| ATCG00580 | PSBE | photosystem II reaction center protein E | 0.14 | OrthoFinder output from all 47 species | |
| Azfi_s0026.g023366 | No alias | not classified & original description: CDS=1-432 | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.01G106000.1 | PSBE, Ceric.01G106000 | component alpha *(PsbE) of PS-II cytochrome b559... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.02G014900.1 | PSBE, Ceric.02G014900 | component *(PsbL) of PS-II complex & original... | 0.11 | OrthoFinder output from all 47 species | |
| Ceric.05G050500.1 | PSBE, Ceric.05G050500 | component *(PsbL) of PS-II complex & original... | 0.27 | OrthoFinder output from all 47 species | |
| LOC_Os06g39728.1 | LOC_Os06g39728 | component alpha/PsbE of PS-II cytochrome b559 heterodimer | 0.14 | OrthoFinder output from all 47 species | |
| LOC_Os08g15322.1 | LOC_Os08g15322 | component alpha/PsbE of PS-II cytochrome b559 heterodimer | 0.13 | OrthoFinder output from all 47 species | |
| LOC_Os10g21298.1 | LOC_Os10g21298 | component alpha/PsbE of PS-II cytochrome b559 heterodimer | 0.13 | OrthoFinder output from all 47 species | |
| Pp3c6_17850V3.1 | Pp3c6_17850 | photosystem II reaction center protein E | 0.01 | OrthoFinder output from all 47 species | |
| Smo137822 | PSBE | Photosynthesis.photophosphorylation.photosystem II.PS-II... | 0.15 | OrthoFinder output from all 47 species | |
| Solyc00g500021.1.1 | PSBE, Solyc00g500021 | component alpha/PsbE of PS-II cytochrome b559... | 0.15 | OrthoFinder output from all 47 species | |
| Solyc00g500068.1.1 | PSBE, Solyc00g500068 | component alpha/PsbE of PS-II cytochrome b559... | 0.15 | OrthoFinder output from all 47 species | |
| Solyc10g045230.1.1 | PSBE, Solyc10g045230 | component alpha/PsbE of PS-II cytochrome b559... | 0.15 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
| BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
| CC | GO:0009579 | thylakoid | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015977 | carbon fixation | IEP | HCCA |
| BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| MF | GO:0016984 | ribulose-bisphosphate carboxylase activity | IEP | HCCA |
| BP | GO:0017004 | cytochrome complex assembly | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
| MF | GO:0034061 | DNA polymerase activity | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1902600 | proton transmembrane transport | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |