Ceric.37G026800.1 (Ceric.37G026800)

Aliases : Ceric.37G026800

Description : DNA polymerase eta *(POLH) & original description: pacid=50616248 polypeptide=Ceric.37G026800.1.p locus=Ceric.37G026800 ID=Ceric.37G026800.1.v2.1 annot-version=v2.1

Gene families : OG0007928 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007928_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.37G026800.1
Cluster	HCCA: Cluster_114

Target	Alias	Description	ECC score	Gene Family Method
Aop_g08535	No alias	DNA polymerase eta *(POLH) & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g23202	No alias	DNA polymerase eta *(POLH) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g43877	No alias	DNA polymerase eta *(POLH) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g17043	No alias	DNA polymerase eta *(POLH) & original description: none	0.03	OrthoFinder output from all 47 species
Len_g13860	No alias	DNA polymerase eta *(POLH) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g10972	No alias	DNA polymerase eta *(POLH) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003684	damaged DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
MF	GO:0004455	ketol-acid reductoisomerase activity	IEP	HCCA
CC	GO:0005730	nucleolus	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006284	base-excision repair	IEP	HCCA
MF	GO:0008134	transcription factor binding	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
BP	GO:0009081	branched-chain amino acid metabolic process	IEP	HCCA
BP	GO:0009082	branched-chain amino acid biosynthetic process	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041298	UBZ3	606	637
IPR017961	DNA_pol_Y-fam_little_finger	294	410
IPR001126	UmuC	27	206

External Links

No external refs found!

Ceric.37G026800.1 (Ceric.37G026800)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation