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  5. Ceric.30G020500.1

Ceric.30G020500.1 (DDB1A, Ceric.30G020500)


Aliases : DDB1A, Ceric.30G020500

Description : core adaptor component *(DDB1) of CUL4-based E3 ubiquitin ligase complexes & original description: pacid=50609173 polypeptide=Ceric.30G020500.1.p locus=Ceric.30G020500 ID=Ceric.30G020500.1.v2.1 annot-version=v2.1


Gene families : OG0004030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.30G020500.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g015691 DDB1A core adaptor component *(DDB1) of CUL4-based E3... 0.04 OrthoFinder output from all 47 species
Ala_g09123 DDB1A core adaptor component *(DDB1) of CUL4-based E3... 0.04 OrthoFinder output from all 47 species
Als_g03248 DDB1A core adaptor component *(DDB1) of CUL4-based E3... 0.03 OrthoFinder output from all 47 species
Aop_g09805 DDB1A core adaptor component *(DDB1) of CUL4-based E3... 0.03 OrthoFinder output from all 47 species
Cba_g02733 DDB1A core adaptor component *(DDB1) of CUL4-based E3... 0.04 OrthoFinder output from all 47 species
Cre10.g432000 DDB1A Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Dcu_g08979 DDB1A core adaptor component *(DDB1) of CUL4-based E3... 0.06 OrthoFinder output from all 47 species
GSVIVT01021587001 DDB1A Protein degradation.peptide tagging.Ubiquitin... 0.05 OrthoFinder output from all 47 species
Gb_36569 DDB1A component DDB1 of UV-damaged DNA-binding protein... 0.04 OrthoFinder output from all 47 species
LOC_Os05g51480.1 DDB1A, LOC_Os05g51480 component DDB1 of UV-damaged DNA-binding protein... 0.08 OrthoFinder output from all 47 species
Lfl_g16439 DDB1A core adaptor component *(DDB1) of CUL4-based E3... 0.04 OrthoFinder output from all 47 species
MA_41156g0010 DDB1A component DDB1 of UV-damaged DNA-binding protein... 0.05 OrthoFinder output from all 47 species
Msp_g02097 DDB1A core adaptor component *(DDB1) of CUL4-based E3... 0.03 OrthoFinder output from all 47 species
Ore_g15533 DDB1A core adaptor component *(DDB1) of CUL4-based E3... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0201.g025613 DDB1A core adaptor component *(DDB1) of CUL4-based E3... 0.04 OrthoFinder output from all 47 species
Sam_g12601 No alias core adaptor component *(DDB1) of CUL4-based E3... 0.02 OrthoFinder output from all 47 species
Solyc02g021650.3.1 DDB1A, Solyc02g021650 component DDB1 of UV-damaged DNA-binding protein... 0.04 OrthoFinder output from all 47 species
Tin_g01283 DDB1A core adaptor component *(DDB1) of CUL4-based E3... 0.06 OrthoFinder output from all 47 species
Zm00001e026665_P002 DDB1A, Zm00001e026665 component DDB1 of UV-damaged DNA-binding protein... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR018846 Cleavage/polyA-sp_fac_asu_N 76 537
IPR004871 Cleavage/polyA-sp_fac_asu_C 745 1057
No external refs found!