Ehy_g01640 (EMB2247)


Aliases : EMB2247

Description : EC_6.1 ligase forming carbon-oxygen bond & original description: none


Gene families : OG0001685 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001685_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g01640
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Adi_g013160 EMB2247 EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
Ala_g39122 EMB2247 EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Mp2g20730.1 EMB2247 valine-tRNA ligase 0.02 OrthoFinder output from all 47 species
Ppi_g56587 EMB2247 EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0056.g014522 EMB2247 EC_6.1 ligase forming carbon-oxygen bond & original... 0.04 OrthoFinder output from all 47 species
Solyc12g019100.2.1 EMB2247, Solyc12g019100 Valine--tRNA ligase, chloroplastic/mitochondrial 2... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004832 valine-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006438 valyl-tRNA aminoacylation IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0032954 regulation of cytokinetic process IEP HCCA
BP GO:0032955 regulation of division septum assembly IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:1901891 regulation of cell septum assembly IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR002300 aa-tRNA-synth_Ia 96 655
IPR013155 M/V/L/I-tRNA-synth_anticd-bd 704 850
IPR019499 Val-tRNA_synth_tRNA-bd 913 978
No external refs found!