Ceric.28G028400.1 (OVA1, Ceric.28G028400)


Aliases : OVA1, Ceric.28G028400

Description : methionine-tRNA ligase & original description: pacid=50570837 polypeptide=Ceric.28G028400.1.p locus=Ceric.28G028400 ID=Ceric.28G028400.1.v2.1 annot-version=v2.1


Gene families : OG0004238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004238_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.28G028400.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00101170 OVA1,... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.05 OrthoFinder output from all 47 species
Ala_g10623 OVA1 methionine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16251 OVA1 methionine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03436 OVA1 methionine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g70167 OVA1 methionine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020675.1 OVA1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.01 OrthoFinder output from all 47 species
Cre12.g487100 OVA1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.09 OrthoFinder output from all 47 species
Dac_g09156 OVA1 methionine-tRNA ligase & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g07108 OVA1 methionine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07779 OVA1 methionine-tRNA ligase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01016575001 OVA1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.14 OrthoFinder output from all 47 species
Gb_24980 OVA1 Methionine--tRNA ligase, chloroplastic/mitochondrial... 0.06 OrthoFinder output from all 47 species
LOC_Os03g11120.1 OVA1, LOC_Os03g11120 methionine-tRNA ligase 0.06 OrthoFinder output from all 47 species
Len_g18280 OVA1 methionine-tRNA ligase & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g07353 OVA1 methionine-tRNA ligase & original description: none 0.04 OrthoFinder output from all 47 species
MA_10432167g0010 OVA1 methionine-tRNA ligase 0.02 OrthoFinder output from all 47 species
Mp2g16770.1 OVA1 methionine-tRNA ligase 0.09 OrthoFinder output from all 47 species
Msp_g13262 OVA1 methionine-tRNA ligase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g25309 OVA1 methionine-tRNA ligase & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g13764 OVA1 methionine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016381 OVA1 methionine-tRNA ligase & original description: CDS=128-1948 0.08 OrthoFinder output from all 47 species
Sam_g39434 No alias methionine-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Smo154280 OVA1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.05 OrthoFinder output from all 47 species
Solyc05g054600.3.1 OVA1, Solyc05g054600 methionine-tRNA ligase 0.08 OrthoFinder output from all 47 species
Spa_g39108 OVA1 methionine-tRNA ligase & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g08238 OVA1 methionine-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000706_P004 OVA1, Zm00001e000706 methionine-tRNA ligase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0004820 glycine-tRNA ligase activity IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
MF GO:0004832 valine-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006426 glycyl-tRNA aminoacylation IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
BP GO:0006438 valyl-tRNA aminoacylation IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR015413 Methionyl/Leucyl_tRNA_Synth 224 451
IPR015413 Methionyl/Leucyl_tRNA_Synth 93 223
IPR041872 Anticodon_Met 480 602
No external refs found!