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  5. Ceric.27G024200.1

Ceric.27G024200.1 (Ceric.27G024200)


Aliases : Ceric.27G024200

Description : 5,10-methenyl-THF synthetase & original description: pacid=50605006 polypeptide=Ceric.27G024200.1.p locus=Ceric.27G024200 ID=Ceric.27G024200.1.v2.1 annot-version=v2.1


Gene families : OG0003580 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003580_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.27G024200.1
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Adi_g054516 No alias 5,10-methenyl-THF synthetase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06033 No alias 5,10-methenyl-THF synthetase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g17445 No alias 5,10-methenyl-THF synthetase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05916 No alias 5,10-methenyl-THF synthetase & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04280 No alias 5,10-methenyl-THF synthetase & original description: none 0.05 OrthoFinder output from all 47 species
Cre13.g587450 No alias Coenzyme metabolism.tetrahydrofolate... 0.03 OrthoFinder output from all 47 species
Dac_g23298 No alias 5,10-methenyl-THF synthetase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g12998 No alias 5,10-methenyl-THF synthetase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g52013 No alias 5,10-methenyl-THF synthetase & original description: none 0.07 OrthoFinder output from all 47 species
LOC_Os12g07020.1 LOC_Os12g07020 5,10-methenyl-THF synthetase 0.03 OrthoFinder output from all 47 species
Len_g05341 No alias 5,10-methenyl-THF synthetase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g01289 No alias 5,10-methenyl-THF synthetase & original description: none 0.07 OrthoFinder output from all 47 species
MA_372753g0010 No alias 5,10-methenyl-THF synthetase 0.02 OrthoFinder output from all 47 species
Msp_g48305 No alias 5,10-methenyl-THF synthetase & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g09827 No alias 5,10-methenyl-THF synthetase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35372 No alias 5,10-methenyl-THF synthetase & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g06813 No alias 5,10-methenyl-THF synthetase & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g48624 No alias 5,10-methenyl-THF synthetase & original description: none 0.06 OrthoFinder output from all 47 species
Smo88014 No alias Coenzyme metabolism.tetrahydrofolate... 0.04 OrthoFinder output from all 47 species
Spa_g04511 No alias 5,10-methenyl-THF synthetase & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g31772 No alias 5,10-methenyl-THF synthetase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e039459_P001 Zm00001e039459 5,10-methenyl-THF synthetase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002698 FTHF_cligase 124 322
IPR000504 RRM_dom 401 468
No external refs found!