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Aliases : Ceric.25G027100
Description : not classified & original description: pacid=50594480 polypeptide=Ceric.25G027100.1.p locus=Ceric.25G027100 ID=Ceric.25G027100.1.v2.1 annot-version=v2.1
Gene families : OG0000185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000185_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00265700 | evm_27.TU.AmTr_v1... | RNA-binding KH domain-containing protein RCF3... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00033p00116200 | evm_27.TU.AmTr_v1... | KH domain-containing protein HEN4 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AT2G03110 | No alias | RNA binding;nucleic acid binding | 0.03 | OrthoFinder output from all 47 species | |
| AT4G18375 | No alias | RNA-binding KH domain-containing protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G53060 | No alias | RNA-binding KH domain-containing protein | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g054729 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g059303 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g074054 | HEN4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g106357 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g108733 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g115536 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g03920 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g02047 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05589 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07063 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g08517 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g08834 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g09611 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g16566 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19267 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g25451 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Als_g33155 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g61202 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g02905 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g29218 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g62599 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g03276 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g05938 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07160 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g12254 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g17642 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29669 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g71670 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.14G007100.1 | Ceric.14G007100 | not classified & original description: pacid=50632910... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g09565 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g11897 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g16018 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g03944 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g10791 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g12897 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g24061 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g18057 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01029591001 | No alias | RNA-binding KH domain-containing protein RCF3... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01031037001 | No alias | KH domain-containing protein At4g18375 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g13470.1 | LOC_Os01g13470 | RNA-binding KH domain-containing protein RCF3... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g23460.1 | LOC_Os06g23460 | RNA-binding KH domain-containing protein RCF3... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os09g32300.1 | LOC_Os09g32300 | KH domain-containing protein HEN4 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g07805 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g18926 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g03080 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g04773 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_10433640g0010 | No alias | KH domain-containing protein At4g18375 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_6622g0010 | No alias | KH domain-containing protein At4g18375 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g10485 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g12132 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g05364 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g15528 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g37389 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g38350 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g14000 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g19011 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g12960 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0020.g008079 | No alias | not classified & original description: CDS=527-2194 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0108.g020404 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g08472 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g13844 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16383 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g067210.3.1 | Solyc02g067210 | KH domain-containing protein At4g18375 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g034200.3.1 | Solyc03g034200 | RNA-binding KH domain-containing protein RCF3... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g082980.3.1 | Solyc03g082980 | RNA-binding KH domain-containing protein RCF3... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g007810.3.1 | Solyc05g007810 | RNA-binding KH domain-containing protein RCF3... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc12g055780.3.1 | Solyc12g055780 | RNA-binding KH domain-containing protein RCF3... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g17412 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g53383 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g02804 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g07199 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g09067 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e037033_P001 | Zm00001e037033 | RNA-binding KH domain-containing protein RCF3... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003682 | chromatin binding | IEP | HCCA |
| MF | GO:0003729 | mRNA binding | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| CC | GO:0005685 | U1 snRNP | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| BP | GO:0006376 | mRNA splice site selection | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | HCCA |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
| BP | GO:0031123 | RNA 3'-end processing | IEP | HCCA |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | HCCA |
| BP | GO:0034728 | nucleosome organization | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
| CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| No external refs found! |