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  5. Ceric.22G016300.1

Ceric.22G016300.1 (SFR6, Ceric.22G016300)


Aliases : SFR6, Ceric.22G016300

Description : component *(MED16) of tail module of MEDIATOR transcription co-activator complex & original description: pacid=50615154 polypeptide=Ceric.22G016300.1.p locus=Ceric.22G016300 ID=Ceric.22G016300.1.v2.1 annot-version=v2.1


Gene families : OG0004636 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004636_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.22G016300.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g019103 SFR6 component *(MED16) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Aev_g01581 SFR6 component *(MED16) of tail module of MEDIATOR... 0.04 OrthoFinder output from all 47 species
Ala_g22100 SFR6 component *(MED16) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Aop_g63638 SFR6 component *(MED16) of tail module of MEDIATOR... 0.04 OrthoFinder output from all 47 species
Dac_g31022 SFR6 component *(MED16) of tail module of MEDIATOR... 0.05 OrthoFinder output from all 47 species
Dde_g10197 SFR6 component *(MED16) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Gb_16787 SFR6 component MED16 of tail module of MEDIATOR transcription... 0.1 OrthoFinder output from all 47 species
LOC_Os10g35560.1 SFR6, LOC_Os10g35560 component MED16 of tail module of MEDIATOR transcription... 0.09 OrthoFinder output from all 47 species
Len_g21218 SFR6 component *(MED16) of tail module of MEDIATOR... 0.06 OrthoFinder output from all 47 species
MA_10435759g0010 SFR6 component MED16 of tail module of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
MA_176669g0010 SFR6 component MED16 of tail module of MEDIATOR transcription... 0.05 OrthoFinder output from all 47 species
Mp4g19580.1 SFR6 component MED16 of tail module of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Msp_g24817 SFR6 component *(MED16) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Ore_g19699 SFR6 component *(MED16) of tail module of MEDIATOR... 0.06 OrthoFinder output from all 47 species
Pir_g09806 SFR6 component *(MED16) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Sam_g29952 No alias component *(MED16) of tail module of MEDIATOR... 0.04 OrthoFinder output from all 47 species
Spa_g08446 SFR6 component *(MED16) of tail module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Tin_g02895 SFR6 component *(MED16) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Zm00001e004466_P003 SFR6, Zm00001e004466 component MED16 of tail module of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0016972 thiol oxidase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!