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  5. Ehy_g01039

Ehy_g01039


Description : not classified & original description: none


Gene families : OG0006499 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006499_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g01039

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00020p00012640 evm_27.TU.AmTr_v1... 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea 0.03 OrthoFinder output from all 47 species
AT3G23700 No alias Nucleic acid-binding proteins superfamily 0.05 OrthoFinder output from all 47 species
Aev_g03265 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g04569 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g08286 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g01702 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g27368 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene14361.t1 Aspi01Gene14361 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0534.g076070 No alias not classified & original description: CDS=250-1461 0.09 OrthoFinder output from all 47 species
Cba_g16549 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.11G080900.1 Ceric.11G080900 not classified & original description: pacid=50596374... 0.04 OrthoFinder output from all 47 species
Dac_g02753 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g03799 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g07957 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01031632001 No alias 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea 0.04 OrthoFinder output from all 47 species
Gb_13624 No alias 30S ribosomal protein S1, chloroplastic OS=Spinacia... 0.06 OrthoFinder output from all 47 species
LOC_Os03g62780.1 LOC_Os03g62780 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g12635 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g01511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_37826g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp6g19820.1 No alias 30S ribosomal protein S1, chloroplastic OS=Spinacia... 0.03 OrthoFinder output from all 47 species
Msp_g04843 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g26841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12492 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g01274 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ppi_g05108 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Sacu_v1.1_s0160.g023855 No alias not classified & original description: CDS=194-1321 0.05 OrthoFinder output from all 47 species
Sam_g30081 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g39278 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo96268 No alias 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea 0.04 OrthoFinder output from all 47 species
Spa_g11144 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g18988 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g23785 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e006347_P003 Zm00001e006347 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004418 hydroxymethylbilane synthase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003029 S1_domain 172 250
IPR003029 S1_domain 91 160
No external refs found!