Ceric.20G012400.1 (EMB86, EMB1030,...)

Aliases : EMB86, EMB1030, EMB263, Ceric.20G012400

Description : EC_6.1 ligase forming carbon-oxygen bond & original description: pacid=50565878 polypeptide=Ceric.20G012400.1.p locus=Ceric.20G012400 ID=Ceric.20G012400.1.v2.1 annot-version=v2.1

Gene families : OG0001528 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001528_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.20G012400.1
Cluster	HCCA: Cluster_131

Target	Alias	Description	ECC score	Gene Family Method
AT5G22800	EMB86, EMB1030, EMB263	Alanyl-tRNA synthetase, class IIc	0.05	OrthoFinder output from all 47 species
Aev_g15227	EMB86, EMB1030, EMB263	EC_6.1 ligase forming carbon-oxygen bond & original...	0.06	OrthoFinder output from all 47 species
Ala_g13265	EMB86, EMB1030, EMB263	EC_6.1 ligase forming carbon-oxygen bond & original...	0.06	OrthoFinder output from all 47 species
Als_g05106	EMB86, EMB1030, EMB263	EC_6.1 ligase forming carbon-oxygen bond & original...	0.06	OrthoFinder output from all 47 species
Aob_g06066	EMB86, EMB1030, EMB263	EC_6.1 ligase forming carbon-oxygen bond & original...	0.05	OrthoFinder output from all 47 species
Aop_g08353	EMB86, EMB1030, EMB263	EC_6.1 ligase forming carbon-oxygen bond & original...	0.1	OrthoFinder output from all 47 species
Aspi01Gene12707.t1	EMB86, EMB1030,...	EC_6.1 ligase forming carbon-oxygen bond & original...	0.04	OrthoFinder output from all 47 species
Azfi_s0114.g046026	EMB86, EMB1030, EMB263	EC_6.1 ligase forming carbon-oxygen bond & original...	0.08	OrthoFinder output from all 47 species
Cba_g14026	EMB86, EMB1030, EMB263	EC_6.1 ligase forming carbon-oxygen bond & original...	0.07	OrthoFinder output from all 47 species
Cre02.g143200	ACD, ALATS	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.04	OrthoFinder output from all 47 species
Cre08.g368900	EMB86, EMB1030, EMB263	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.07	OrthoFinder output from all 47 species
Dac_g09278	EMB86, EMB1030, EMB263	EC_6.1 ligase forming carbon-oxygen bond & original...	0.04	OrthoFinder output from all 47 species
Dde_g10945	ACD, ALATS	EC_6.1 ligase forming carbon-oxygen bond & original...	0.03	OrthoFinder output from all 47 species
Dde_g11577	EMB86, EMB1030, EMB263	EC_6.1 ligase forming carbon-oxygen bond & original...	0.06	OrthoFinder output from all 47 species
Ehy_g20259	EMB86, EMB1030, EMB263	EC_6.1 ligase forming carbon-oxygen bond & original...	0.08	OrthoFinder output from all 47 species
GSVIVT01023918001	EMB86, EMB1030, EMB263	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.05	OrthoFinder output from all 47 species
Gb_36215	EMB86, EMB1030, EMB263	alanine-tRNA ligase	0.06	OrthoFinder output from all 47 species
LOC_Os06g13660.1	EMB86, EMB1030,...	alanine-tRNA ligase	0.09	OrthoFinder output from all 47 species
Len_g17359	EMB86, EMB1030, EMB263	EC_6.1 ligase forming carbon-oxygen bond & original...	0.08	OrthoFinder output from all 47 species
Lfl_g12875	EMB86, EMB1030, EMB263	EC_6.1 ligase forming carbon-oxygen bond & original...	0.1	OrthoFinder output from all 47 species
MA_10282308g0010	EMB86, EMB1030, EMB263	alanine-tRNA ligase	0.08	OrthoFinder output from all 47 species
Mp1g23620.1	EMB86, EMB1030, EMB263	alanine-tRNA ligase	0.02	OrthoFinder output from all 47 species
Msp_g25185	EMB86, EMB1030, EMB263	EC_6.1 ligase forming carbon-oxygen bond & original...	0.05	OrthoFinder output from all 47 species
Nbi_g21729	EMB86, EMB1030, EMB263	EC_6.1 ligase forming carbon-oxygen bond & original...	0.05	OrthoFinder output from all 47 species
Ore_g04464	ACD, ALATS	EC_6.1 ligase forming carbon-oxygen bond & original...	0.02	OrthoFinder output from all 47 species
Ore_g08778	EMB86, EMB1030, EMB263	EC_6.1 ligase forming carbon-oxygen bond & original...	0.07	OrthoFinder output from all 47 species
Pir_g64933	EMB86, EMB1030, EMB263	EC_6.1 ligase forming carbon-oxygen bond & original...	0.04	OrthoFinder output from all 47 species
Pnu_g26458	EMB86, EMB1030, EMB263	EC_6.1 ligase forming carbon-oxygen bond & original...	0.05	OrthoFinder output from all 47 species
Ppi_g56809	EMB86, EMB1030, EMB263	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017335	EMB86, EMB1030, EMB263	EC_6.1 ligase forming carbon-oxygen bond & original...	0.06	OrthoFinder output from all 47 species
Sam_g26484	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.07	OrthoFinder output from all 47 species
Solyc01g111990.3.1	EMB86, EMB1030,...	alanine-tRNA ligase	0.08	OrthoFinder output from all 47 species
Spa_g39932	EMB86, EMB1030, EMB263	EC_6.1 ligase forming carbon-oxygen bond & original...	0.04	OrthoFinder output from all 47 species
Tin_g43549	EMB86, EMB1030, EMB263	EC_6.1 ligase forming carbon-oxygen bond & original...	0.03	OrthoFinder output from all 47 species
Zm00001e036036_P002	EMB86, EMB1030,...	alanine-tRNA ligase	0.12	OrthoFinder output from all 47 species
Zm00001e039615_P001	ACD, ALATS,...	alanine-tRNA ligase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEA	Interproscan
MF	GO:0004813	alanine-tRNA ligase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006418	tRNA aminoacylation for protein translation	None	Extended
BP	GO:0006419	alanyl-tRNA aminoacylation	IEA	Interproscan
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043038	amino acid activation	None	Extended
BP	GO:0043039	tRNA aminoacylation	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0004177	aminopeptidase activity	IEP	HCCA
MF	GO:0004540	ribonuclease activity	IEP	HCCA
MF	GO:0004827	proline-tRNA ligase activity	IEP	HCCA
MF	GO:0004832	valine-tRNA ligase activity	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006433	prolyl-tRNA aminoacylation	IEP	HCCA
BP	GO:0006438	valyl-tRNA aminoacylation	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	HCCA
BP	GO:0017038	protein import	IEP	HCCA
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003156	DHHA1_dom	861	997
IPR012947	tRNA_SAD	777	820
IPR018164	Ala-tRNA-synth_IIc_N	119	678

External Links

No external refs found!

Ceric.20G012400.1 (EMB86, EMB1030,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation