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  5. Ceric.1Z018800.1

Ceric.1Z018800.1 (PSBE, Ceric.1Z018800)


Aliases : PSBE, Ceric.1Z018800

Description : component alpha *(PsbE) of PS-II cytochrome b559 heterodimer & original description: pacid=50586365 polypeptide=Ceric.1Z018800.1.p locus=Ceric.1Z018800 ID=Ceric.1Z018800.1.v2.1 annot-version=v2.1


Gene families : OG0009554 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009554_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.1Z018800.1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00334p00011530 PSBE,... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.06 OrthoFinder output from all 47 species
ATCG00580 PSBE photosystem II reaction center protein E 0.14 OrthoFinder output from all 47 species
Azfi_s0026.g023366 No alias not classified & original description: CDS=1-432 0.06 OrthoFinder output from all 47 species
Ceric.01G106000.1 PSBE, Ceric.01G106000 component alpha *(PsbE) of PS-II cytochrome b559... 0.02 OrthoFinder output from all 47 species
Ceric.02G014900.1 PSBE, Ceric.02G014900 component *(PsbL) of PS-II complex & original... 0.11 OrthoFinder output from all 47 species
Ceric.05G050500.1 PSBE, Ceric.05G050500 component *(PsbL) of PS-II complex & original... 0.27 OrthoFinder output from all 47 species
LOC_Os06g39728.1 LOC_Os06g39728 component alpha/PsbE of PS-II cytochrome b559 heterodimer 0.14 OrthoFinder output from all 47 species
LOC_Os08g15322.1 LOC_Os08g15322 component alpha/PsbE of PS-II cytochrome b559 heterodimer 0.13 OrthoFinder output from all 47 species
LOC_Os10g21298.1 LOC_Os10g21298 component alpha/PsbE of PS-II cytochrome b559 heterodimer 0.13 OrthoFinder output from all 47 species
Pp3c6_17850V3.1 Pp3c6_17850 photosystem II reaction center protein E 0.01 OrthoFinder output from all 47 species
Smo137822 PSBE Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.15 OrthoFinder output from all 47 species
Solyc00g500021.1.1 PSBE, Solyc00g500021 component alpha/PsbE of PS-II cytochrome b559... 0.15 OrthoFinder output from all 47 species
Solyc00g500068.1.1 PSBE, Solyc00g500068 component alpha/PsbE of PS-II cytochrome b559... 0.15 OrthoFinder output from all 47 species
Solyc10g045230.1.1 PSBE, Solyc10g045230 component alpha/PsbE of PS-II cytochrome b559... 0.15 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!