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  5. Ceric.15G002000.1

Ceric.15G002000.1 (Ceric.15G002000)


Aliases : Ceric.15G002000

Description : not classified & original description: pacid=50640344 polypeptide=Ceric.15G002000.1.p locus=Ceric.15G002000 ID=Ceric.15G002000.1.v2.1 annot-version=v2.1


Gene families : OG0007491 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007491_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.15G002000.1
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
Adi_g105487 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g03588 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05627 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g15883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13790 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0001.g000993 No alias not classified & original description: CDS=119-3475 0.05 OrthoFinder output from all 47 species
Azfi_s0099.g043991 OTP84 not classified & original description: CDS=230-3472 0.07 OrthoFinder output from all 47 species
Cba_g13501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G004500.1 Ceric.02G004500 not classified & original description: pacid=50584632... 0.08 OrthoFinder output from all 47 species
Dac_g10625 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g14757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03497 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21687 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g22749 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04999 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g05004 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g14230 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13553 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g54056 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g08245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009384 No alias not classified & original description: CDS=123-3881 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0234.g026528 No alias not classified & original description: CDS=213-3461 0.05 OrthoFinder output from all 47 species
Sam_g08396 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g09082 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g16249 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g15754 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g21963 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g07066 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR032867 DYW_dom 1072 1151
IPR002885 Pentatricopeptide_repeat 467 513
IPR002885 Pentatricopeptide_repeat 264 311
IPR002885 Pentatricopeptide_repeat 767 815
IPR002885 Pentatricopeptide_repeat 368 414
IPR002885 Pentatricopeptide_repeat 674 697
IPR002885 Pentatricopeptide_repeat 741 764
IPR002885 Pentatricopeptide_repeat 573 601
No external refs found!