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  5. Ceric.14G043100.1

Ceric.14G043100.1 (UPF1, ATUPF1, LBA1,...)


Aliases : UPF1, ATUPF1, LBA1, Ceric.14G043100

Description : not classified & original description: pacid=50633274 polypeptide=Ceric.14G043100.1.p locus=Ceric.14G043100 ID=Ceric.14G043100.1.v2.1 annot-version=v2.1


Gene families : OG0001598 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001598_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.14G043100.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Aop_g29541 UPF1, ATUPF1, LBA1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g22041 UPF1, ATUPF1, LBA1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_24647 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g08024 UPF1, ATUPF1, LBA1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13143 UPF1, ATUPF1, LBA1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g11374 UPF1, ATUPF1, LBA1 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR041679 DNA2/NAM7-like_C 581 776
IPR041677 DNA2/NAM7_AAA_11 356 572
No external refs found!