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  5. Ceric.13G084500.1

Ceric.13G084500.1 (Ceric.13G084500)


Aliases : Ceric.13G084500

Description : basal transcription factor *(TFIa/RRN3) & original description: pacid=50635357 polypeptide=Ceric.13G084500.1.p locus=Ceric.13G084500 ID=Ceric.13G084500.1.v2.1 annot-version=v2.1


Gene families : OG0004620 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004620_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.13G084500.1

Target Alias Description ECC score Gene Family Method Actions
Ala_g05450 No alias basal transcription factor *(TFIa/RRN3) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010018 No alias basal transcription factor *(TFIa/RRN3) & original... 0.04 OrthoFinder output from all 47 species
Cre03.g207950 No alias RNA biosynthesis.RNA polymerase I-dependent... 0.03 OrthoFinder output from all 47 species
Dac_g11606 No alias basal transcription factor *(TFIa/RRN3) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g06620 No alias basal transcription factor *(TFIa/RRN3) & original... 0.05 OrthoFinder output from all 47 species
Mp6g17000.1 No alias basal transcription factor (TFIa/RRN3) 0.02 OrthoFinder output from all 47 species
Ore_g07151 No alias basal transcription factor *(TFIa/RRN3) & original... 0.04 OrthoFinder output from all 47 species
Sam_g27581 No alias basal transcription factor *(TFIa/RRN3) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0001181 RNA polymerase I general transcription initiation factor activity IEA Interproscan
BP GO:0006361 transcription initiation at RNA polymerase I promoter IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0061608 nuclear import signal receptor activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
InterPro domains Description Start Stop
IPR007991 RNA_pol_I_trans_ini_fac_RRN3 27 575
No external refs found!