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  5. Ceric.09G069000.1

Ceric.09G069000.1 (Ceric.09G069000)


Aliases : Ceric.09G069000

Description : EC_5.4 intramolecular transferase & original description: pacid=50588373 polypeptide=Ceric.09G069000.1.p locus=Ceric.09G069000 ID=Ceric.09G069000.1.v2.1 annot-version=v2.1


Gene families : OG0006025 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006025_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.09G069000.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00184260 evm_27.TU.AmTr_v1... RNA processing.RNA... 0.03 OrthoFinder output from all 47 species
Aob_g12469 No alias EC_5.4 intramolecular transferase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11010 No alias EC_5.4 intramolecular transferase & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01008716001 No alias RNA processing.RNA... 0.03 OrthoFinder output from all 47 species
Gb_06538 No alias tRNA pseudouridine synthase (TruA) 0.02 OrthoFinder output from all 47 species
Lfl_g02176 No alias EC_5.4 intramolecular transferase & original description: none 0.05 OrthoFinder output from all 47 species
Mp7g06450.1 No alias tRNA pseudouridine synthase (TruA) 0.03 OrthoFinder output from all 47 species
Tin_g10018 No alias EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015383_P004 Zm00001e015383 tRNA pseudouridine synthase (TruA) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0009451 RNA modification IEA Interproscan
MF GO:0009982 pseudouridine synthase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0030488 tRNA methylation IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP HCCA
BP GO:0032259 methylation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
CC GO:0034708 methyltransferase complex IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
CC GO:0043527 tRNA methyltransferase complex IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR020097 PsdUridine_synth_TruA_a/b_dom 615 720
No external refs found!