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  5. Ceric.01G054800.1

Ceric.01G054800.1 (PRH75, Ceric.01G054800)


Aliases : PRH75, Ceric.01G054800

Description : not classified & original description: pacid=50590947 polypeptide=Ceric.01G054800.1.p locus=Ceric.01G054800 ID=Ceric.01G054800.1.v2.1 annot-version=v2.1


Gene families : OG0000466 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000466_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.01G054800.1

Target Alias Description ECC score Gene Family Method Actions
Als_g01062 PRH75 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14234 PRH75 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18513 PRH75 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g01233 PRH75 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07520 emb1138 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g18561 PRH75 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre02.g118300 PRH75 DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Dcu_g16656 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g15362 emb1138 group-II intron splicing RNA helicase *(PMH) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01000821001 PMH2, ATRH53 RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
MA_17924g0020 PRH75 DEAD-box ATP-dependent RNA helicase 7 OS=Spinacia... 0.04 OrthoFinder output from all 47 species
Ore_g38810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30474 PRH75 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016750 PRH75 not classified & original description: CDS=177-2189 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0281.g027107 PRH75 not classified & original description: CDS=248-2341 0.03 OrthoFinder output from all 47 species
Smo150370 PRH75 DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Zm00001e011716_P001 emb1138, Zm00001e011716 RH3 plastidial RNA basal splicing factor 0.02 OrthoFinder output from all 47 species
Zm00001e032797_P007 PMH2, ATRH53,... RNA helicase (PMH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004455 ketol-acid reductoisomerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 222 399
IPR001650 Helicase_C 444 543
IPR012562 GUCT 633 727
No external refs found!