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  5. Ceric.01G032400.1

Ceric.01G032400.1 (Ceric.01G032400)


Aliases : Ceric.01G032400

Description : pre-rRNA processing endonuclease involved in ITS1 rRNA removal *(NOB1) & original description: pacid=50592949 polypeptide=Ceric.01G032400.1.p locus=Ceric.01G032400 ID=Ceric.01G032400.1.v2.1 annot-version=v2.1


Gene families : OG0006353 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006353_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.01G032400.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00064100 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 OrthoFinder output from all 47 species
AT5G41190 No alias CONTAINS InterPro DOMAIN/s: Nin one binding (NOB1)... 0.04 OrthoFinder output from all 47 species
Cre01.g031750 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder output from all 47 species
GSVIVT01019776001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder output from all 47 species
Mp1g16460.1 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0180.g024790 No alias pre-rRNA processing endonuclease involved in ITS1 rRNA... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR014881 NOB1_Zn-bd 431 501
IPR033411 Ribonuclease_PIN 43 139
No external refs found!