Solyc04g007170.3.1 (Solyc04g007170.3)


Aliases : Solyc04g007170.3

Description : 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein ?//CONTAINS one AP2 domain. There are 12 members in this subfamily including RAP2.11.


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc04g007170.3.1
Cluster HCCA cluster: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
AT1G04370 ERF14, ATERF14 Ethylene-responsive element binding factor 14 0.03 Gene family
AT1G15360 WIN1, SHN1 Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT4G11140 CRF1 cytokinin response factor 1 0.02 Gene family
AT4G32800 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G18450 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G21960 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
GSVIVT01013914001 No alias No description available 0.02 Gene family
GSVIVT01022277001 No alias No description available 0.02 Gene family
GSVIVT01036201001 No alias No description available 0.02 Gene family
LOC_Os01g10370 Os01g0200600 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os03g08500 Os03g0183300 No description available 0.04 Gene family
LOC_Os04g46220 Os04g0546800 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os04g55520 Os04g0648900 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
LOC_Os05g41780 Os05g0497300 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os06g11860 Os06g0222400 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.06 Gene family
LOC_Os07g47790 Os07g0674800 No description available 0.06 Gene family
LOC_Os09g11480 Os09g0287000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_10426586g0010 No alias No description available 0.05 Gene family
MA_10430231g0010 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
MA_137148g0010 No alias No description available 0.02 Gene family
MA_214063g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_28344g0010 No alias No description available 0.02 Gene family
MA_6305g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_67707g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
MA_67841g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_9260020g0010 No alias No description available 0.02 Gene family
MA_959784g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_97319g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
MA_99821g0010 No alias No description available 0.02 Gene family
Solyc01g090320.3.1 Solyc01g090320.3 No description available 0.04 Gene family
Solyc01g090340.2.1 Solyc01g090340.2 No description available 0.03 Gene family
Solyc02g090790.1.1 Solyc02g090790.1 No description available 0.03 Gene family
Solyc03g005520.1.1 Solyc03g005520.1 No description available 0.03 Gene family
Solyc04g054910.3.1 Solyc04g054910.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc05g013540.1.1 Solyc05g013540.1 No description available 0.05 Gene family
Solyc06g068830.2.1 Solyc06g068830.2 No description available 0.04 Gene family
Zm00001d002079 GRMZM2G174917 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d009622 GRMZM2G100982 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d018305 GRMZM2G110333 No description available 0.05 Gene family
Zm00001d019734 GRMZM2G123119 No description available 0.03 Gene family
Zm00001d029940 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d052026 GRMZM2G111415 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 106 156
No external refs found!