Aspi01Gene05227.t2 (ATMRP12, MRP12,...)


Aliases : ATMRP12, MRP12, ABCC11, Aspi01Gene05227

Description : EC_4.1 carbon-carbon lyase & original description: none


Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene05227.t2

Target Alias Description ECC score Gene Family Method Actions
Aev_g04890 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17286 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g34252 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05735 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene04341.t1 MRP6, ATMRP6,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene09685.t1 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene13119.t1 MRP11, ABCC13,... subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19905.t1 MRP6, ATMRP6,... subfamily ABCC transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene22437.t1 EST3, MRP4,... subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26415.t1 EST3, MRP4,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene29535.t1 MRP10, ATMRP10,... subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene35720.t1 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41023.t1 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene45964.t1 ATABCC5, MRP5,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene45971.t1 MRP6, ATMRP6,... subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45971.t2 MRP6, ATMRP6,... subfamily ABCC transporter & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene64347.t1 Aspi01Gene64347 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene64349.t1 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64352.t2 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70431.t1 MRP6, ATMRP6,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13728 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.1Z242200.1 MRP10, ATMRP10,... not classified & original description: pacid=50639218... 0.06 OrthoFinder output from all 47 species
Ceric.21G019800.1 EST3, MRP4,... subfamily ABCC transporter & original description:... 0.07 OrthoFinder output from all 47 species
Dac_g01194 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g12577 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07128 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g25386.1 EST3, MRP4,... subfamily ABCC transporter 0.03 OrthoFinder output from all 47 species
LOC_Os03g04920.1 ATABCC5, MRP5,... subfamily ABCC transporter 0.03 OrthoFinder output from all 47 species
Nbi_g29837 MRP9, ABCC9, ATMRP9 subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07631 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63153 MRP11, ABCC13, ATMRP11 subfamily ABCC transporter & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001693 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: CDS=1-1395 0.02 OrthoFinder output from all 47 species
Sam_g04646 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26052 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006096 glycolytic process IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 1315 1383
IPR003439 ABC_transporter-like_ATP-bd 491 625
IPR000741 FBA_I 1000 1170
IPR011527 ABC1_TM_dom 788 966
IPR011527 ABC1_TM_dom 123 379
No external refs found!