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Aliases : RIK
Description : not classified & original description: none
Gene families : OG0003712 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003712_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dcu_g48860 | |
| Cluster | HCCA: Cluster_57 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00154p00021020 | RIK,... | Protein RIK OS=Zea mays | 0.03 | OrthoFinder output from all 47 species | |
| AT3G29390 | RIK | RS2-interacting KH protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g059163 | RIK | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g23032 | RIK | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Als_g32926 | RIK | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Als_g49526 | RIK | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene70166.t1 | RIK, Aspi01Gene70166 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene70170.t1 | RIK, Aspi01Gene70170 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.06G005800.1 | RIK, Ceric.06G005800 | not classified & original description: pacid=50620160... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020710.38 | No alias | Protein RIK OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
| Cre09.g389900 | No alias | Protein RIK OS=Zea mays | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01032902001 | RIK | Protein RIK OS=Zea mays | 0.04 | OrthoFinder output from all 47 species | |
| Gb_05577 | RIK | Protein RIK OS=Zea mays (sp|q32sg5|rik_maize : 297.0) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g11520.1 | RIK, LOC_Os03g11520 | Protein RIK OS=Zea mays (sp|q32sg5|rik_maize : 566.0) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g58691 | RIK | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g09097 | RIK | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Nbi_g14046 | RIK | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g43004 | RIK | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g04878 | RIK | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g17978 | RIK | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e000840_P001 | RIK, Zm00001e000840 | Protein RIK OS=Zea mays (sp|q32sg5|rik_maize : 896.0) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003729 | mRNA binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
| MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | HCCA |
| MF | GO:0004652 | polynucleotide adenylyltransferase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005685 | U1 snRNP | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006265 | DNA topological change | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006376 | mRNA splice site selection | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | HCCA |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0035299 | inositol pentakisphosphate 2-kinase activity | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043631 | RNA polyadenylation | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| MF | GO:0070566 | adenylyltransferase activity | IEP | HCCA |
| BP | GO:0071103 | DNA conformation change | IEP | HCCA |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |