1. Home
  2. Species
  3. Dicranopteris curranii
  4. Sequence
  5. Dcu_g47737

Dcu_g47737


Description : not classified & original description: none


Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g47737
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Ala_g07724 STK, AGL11 MADS/AGL-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene09663.t1 Aspi01Gene09663 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G082300.1 AGL28, Ceric.04G082300 MADS/AGL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g13201 AGL16 MADS/AGL-type transcription factor & original description: none 0.12 OrthoFinder output from all 47 species
Dcu_g14605 SOC1, AGL20, ATSOC1 MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g05429 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29512 AGL16 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009393001 AGL104 RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
Lfl_g04547 AGL10, CAL1, CAL MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g58877 AGL30 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g065730.2.1 AGL8, FUL, Solyc02g065730 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Solyc04g078300.3.1 AGL104, Solyc04g078300 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR002487 TF_Kbox 1 55
No external refs found!