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  5. Dcu_g46221

Dcu_g46221


Description : regulatory protein *(SOQ1) of non-photochemical quenching & original description: none


Gene families : OG0003626 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003626_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g46221
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AT1G56500 No alias haloacid dehalogenase-like hydrolase family protein 0.08 OrthoFinder output from all 47 species
Adi_g021878 No alias regulatory protein *(SOQ1) of non-photochemical... 0.05 OrthoFinder output from all 47 species
Adi_g102342 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g14013 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g14189 No alias regulatory protein *(SOQ1) of non-photochemical... 0.03 OrthoFinder output from all 47 species
Ala_g09026 No alias regulatory protein *(SOQ1) of non-photochemical... 0.05 OrthoFinder output from all 47 species
Als_g62032 No alias regulatory protein *(SOQ1) of non-photochemical... 0.03 OrthoFinder output from all 47 species
Aspi01Gene46306.t1 Aspi01Gene46306 regulatory protein *(SOQ1) of non-photochemical... 0.04 OrthoFinder output from all 47 species
Ceric.02G025300.1 Ceric.02G025300 regulatory protein *(SOQ1) of non-photochemical... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001339.10 No alias Protein SUPPRESSOR OF QUENCHING 1, chloroplastic... 0.05 OrthoFinder output from all 47 species
Dac_g07066 No alias regulatory protein *(SOQ1) of non-photochemical... 0.05 OrthoFinder output from all 47 species
Dde_g18494 No alias regulatory protein *(SOQ1) of non-photochemical... 0.05 OrthoFinder output from all 47 species
Ehy_g18146 No alias regulatory protein *(SOQ1) of non-photochemical... 0.04 OrthoFinder output from all 47 species
GSVIVT01031253001 No alias Photosynthesis.photophosphorylation.photosystem... 0.08 OrthoFinder output from all 47 species
Gb_14671 No alias SOQ1 non-photochemical quenching regulator protein 0.05 OrthoFinder output from all 47 species
LOC_Os03g19760.1 LOC_Os03g19760 SOQ1 non-photochemical quenching regulator protein 0.06 OrthoFinder output from all 47 species
Len_g47037 No alias regulatory protein *(SOQ1) of non-photochemical... 0.07 OrthoFinder output from all 47 species
Lfl_g10265 No alias regulatory protein *(SOQ1) of non-photochemical... 0.08 OrthoFinder output from all 47 species
MA_129620g0010 No alias Protein SUPPRESSOR OF QUENCHING 1, chloroplastic... 0.03 OrthoFinder output from all 47 species
MA_92686g0010 No alias Protein SUPPRESSOR OF QUENCHING 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
Mp5g22510.1 No alias SOQ1 non-photochemical quenching regulator protein 0.09 OrthoFinder output from all 47 species
Msp_g13160 No alias regulatory protein *(SOQ1) of non-photochemical... 0.04 OrthoFinder output from all 47 species
Nbi_g39429 No alias regulatory protein *(SOQ1) of non-photochemical... 0.03 OrthoFinder output from all 47 species
Ore_g09927 No alias regulatory protein *(SOQ1) of non-photochemical... 0.06 OrthoFinder output from all 47 species
Pir_g20017 No alias regulatory protein *(SOQ1) of non-photochemical... 0.11 OrthoFinder output from all 47 species
Pnu_g14012 No alias regulatory protein *(SOQ1) of non-photochemical... 0.04 OrthoFinder output from all 47 species
Ppi_g08248 No alias regulatory protein *(SOQ1) of non-photochemical... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006621 No alias regulatory protein *(SOQ1) of non-photochemical... 0.04 OrthoFinder output from all 47 species
Sam_g50621 No alias regulatory protein *(SOQ1) of non-photochemical... 0.02 OrthoFinder output from all 47 species
Smo79954 No alias Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
Solyc01g100650.3.1 Solyc01g100650 SOQ1 non-photochemical quenching regulator protein 0.09 OrthoFinder output from all 47 species
Spa_g16040 No alias regulatory protein *(SOQ1) of non-photochemical... 0.08 OrthoFinder output from all 47 species
Tin_g46320 No alias regulatory protein *(SOQ1) of non-photochemical... 0.05 OrthoFinder output from all 47 species
Zm00001e001473_P001 Zm00001e001473 SOQ1 non-photochemical quenching regulator protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035596 methylthiotransferase activity IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050497 alkylthioltransferase activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR041492 HAD_2 126 309
IPR012336 Thioredoxin-like_fold 489 583
IPR001258 NHL_repeat 692 718
No external refs found!