Dcu_g42889


Description : not classified & original description: none


Gene families : OG0004312 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004312_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g42889

Target Alias Description ECC score Gene Family Method Actions
AT3G02120 No alias hydroxyproline-rich glycoprotein family protein 0.02 OrthoFinder output from all 47 species
Als_g27583 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32387 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Aop_g10509 No alias not classified & original description: none 0.16 OrthoFinder output from all 47 species
Aspi01Gene26216.t1 Aspi01Gene26216 not classified & original description: none 0.19 OrthoFinder output from all 47 species
Azfi_s0003.g008107 No alias not classified & original description: CDS=566-952 0.01 OrthoFinder output from all 47 species
Ceric.27G022500.1 Ceric.27G022500 not classified & original description: pacid=50605994... 0.18 OrthoFinder output from all 47 species
Dac_g12700 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g16238 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01032906001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_03841 No alias no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Gb_26295 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Len_g15554 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species
Lfl_g22213 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Lfl_g40624 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
MA_16252g0010 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Mp1g00810.1 No alias no hits & (original description: none) 0.16 OrthoFinder output from all 47 species
Nbi_g02600 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g22942 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Solyc02g088830.4.1 Solyc02g088830 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Spa_g30948 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Spa_g34819 No alias not classified & original description: none 0.19 OrthoFinder output from all 47 species
Tin_g32711 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g41878 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000731 DNA synthesis involved in DNA repair IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!