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  5. Dcu_g22382

Dcu_g22382 (OCP3)


Aliases : OCP3

Description : PINTOX-type transcription factor & original description: none


Gene families : OG0006794 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006794_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g22382
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
AT5G11270 OCP3 overexpressor of cationic peroxidase 3 0.04 OrthoFinder output from all 47 species
Adi_g060407 OCP3 PINTOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14944 OCP3 PINTOX-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os06g39906.1 OCP3, LOC_Os06g39906 transcription factor (PINTOX) 0.04 OrthoFinder output from all 47 species
Lfl_g01183 OCP3 PINTOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Mp1g01010.1 OCP3 transcription factor (PINTOX) 0.02 OrthoFinder output from all 47 species
Sam_g08399 No alias PINTOX-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g08400 No alias PINTOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g061140.3.1 OCP3, Solyc08g061140 transcription factor (PINTOX) 0.04 OrthoFinder output from all 47 species
Zm00001e037326_P001 OCP3, Zm00001e037326 transcription factor (PINTOX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:0140673 transcription elongation-coupled chromatin remodeling IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 312 361
No external refs found!