Dcu_g16542


Description : not classified & original description: none


Gene families : OG0007222 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007222_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g16542

Target Alias Description ECC score Gene Family Method Actions
Als_g08863 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g07211 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g01042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.33G028700.1 Ceric.33G028700 not classified & original description: pacid=50606542... 0.11 OrthoFinder output from all 47 species
Dac_g11589 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os04g46100.1 LOC_Os04g46100 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g06136 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26956 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g17051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020110 No alias not classified & original description: CDS=102-1706 0.05 OrthoFinder output from all 47 species
Sam_g16327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g037900.1.1 Solyc10g037900 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g05972 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e041364_P001 Zm00001e041364 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!